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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71281279, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFSKSATCL AITASLFNVT ASAEQQANND TSNTGNTGNT GNLETITVTS DFRQQNLQNT  60
   61 PASLSVLTDI EINQRNARHL EELVAVSPNV NFASGSQRAR YYQIRGIGER SQFQEPINPS 120
  121 VGMIIDDIDF TGIGSIANLF DVKQAEIFRG PQGTRFGANA IAGMINITTN EPTEDFEGAV 180
  181 QLGVGNYNSY DMGVALSGPA SDTVNYRLAV NQHNSDGFTE NIHLQRDDTN NRDELSVRGK 240
  241 LAIEASNDLT IDLAGFYFDF DNGYDVFSLD NTRETYSDQP GFDQQETAAF SAKFTYTGFE 300
  301 SATLLAIVSH SDTDLGYGYD EDWAFGEYEW RSDDPVYTPD PCITPSGCLA DFDGYSSTDH 360
  361 YYRDKTVLTT ELRAVSNQGQ EIFNGSTAWV AGVYFKQDDE DLLRQYTYAS GDFTSINEST 420
  421 SVALYGQLDT QIAEKWSLMS GLRIENRSAD YNNSDLFDDR IDDTMVGGKL VLSYQQNEDS 480
  481 MWYGSINRGY KAGGHNTDGT LPEDLRTFDP EYLLNYEIGY KVSLLENSAY VRTSVFYMDR 540
  541 EDMQVKSSKT IIREDGSSEF ISYLGNAATG SNYGVEIEGA WYINDLINVY GSLGLLDTEF 600
  601 NDFVNADGVS LSGREQAHAP NYQFNVGINV QPTDHWLINL SVDGKDSFYF SDSHDEQSES 660
  661 VALLNASVAY IQDNWQIKIW GRNLANEDYA NRGFYFGNDP RDGYTAKQYT QLSEPLVFGA 720
  721 TLDYQF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle