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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71280952, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSIKNLLKV SLILLILVSI AVYSLYLSMR SDLPSVELLK DLHWQTPLQV YSQDGLLISQ  60
   61 FGEKKRTPLT LEEVPQQLID ALLATEDDRF YLHFGVDPIG MGRAVLGKLM GQDKGGASTI 120
  121 TMQVARNFFL TREVTYTRKI REIFLSFHIE NLLSKDEILM LYINKIELGH RAFGFGAAAQ 180
  181 VYYGKEIHEL NLAQIAVLAG LPKAPSTLNP IRSPKRAQAR RSVVLQRMLV SGYISDLQYQ 240
  241 TAKNAPITGK RHGAEIELNA PYIAEMAHNE VLKRYGKDKA YTEGYKVFTT VTAKLQTAAE 300
  301 QALVNNLLNY DQRHGYRGPL SSLRPQVRST DDTSEIQIVP LLQKELSKAL SDATYYQMLE 360
  361 PAIVLAVEEK SVSIQLRNKV TATIKWQGLA WARPYINDQK QGRPPKTAKD ILTYGDVILV 420
  421 SKMTDNNYRL GQLPTASAAI VSLSPNDGAI KAAVGGFSFK QSQFNRVTQA KRQVGSNIKP 480
  481 FIYSAALEHG FTLASLVNDA PINQWDKSSG VVWRPRNSPE KYVGLLRVRL ALAQSKNVIA 540
  541 VRLLKSIGVT NTIKHLTTFG FNANDLPRNE TLALGSASLT PLEVATGFAA FANGGFLVEP 600
  601 YLIQRIENSD GEIIYQADPA IACDPCIQTD LSDDTDQELD VLSNNIPDHN ITIEDEQLSK 660
  661 QSEDDQTVEI KQASRIISPQ NAFLITQALN SAIWGADWNT KHVWQGTGFR ARTLKRRDIA 720
  721 GKTGTTNEAK DAWFSGFSRN IVTTSWIGFD DPRHILGQSV YNNNLGKNQT TGKEFGAKSA 780
  781 QPAWIDFMRI ALADAEPEAF QPPVDIVSVR IDKTTGKLTT KTDKTSQFEY FRLGKVPTEY 840
  841 VTEDSSSEIL SGGQQKEEEE ELF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle