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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71146389, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFKSILSLT VAAFVSLLTG CNEGNKLSLS ERSIIYCSEG SPETFNPQLS TSGTTSDATA  60
   61 KQLYNSLIVY KGKSNTLGPA LAKSWHVTRD GKKITFYLRQ DVSFHQTSYF TPTRLLNADD 120
  121 VLFSFNRILD KDHAFHHVSG DQYPFFQSVK FSELVDKIEK INDFTVRFIL KRNDSSFLAN 180
  181 LATDFAVVLS EEYGQILQEK NSEHEIDIFP IGTGPFKLKD YRVGSLIRFY RHDSYWQEKA 240
  241 KIEQLVYDIS PRETSRLTKL LAKECDVSSY PIAHAKIAER TDLQLESITS LNVGYFGFNT 300
  301 QKEPFNNKIV RQAISLAINK QALIETVYQG QAAWAKSILP ETSWAYDKNT PELGYDPVRA 360
  361 KSLLEVAGYP QGFTMDIWAM PVQRPYNPNA VTMAKLIQAD LKKIGVTVKI ISYEWSTFLR 420
  421 RLSQGEHQSF LLGWTADHPD PDNFFTPILS CSASDLGNNR TFWCNKEYDQ LLQQALKTTN 480
  481 MSKRKSYYAK AMAIINEEMP LLPIAHSKRF QARGIDVEGD ILSNFGGISF YSAAKKAINN 540
  541 EAKSEVQPEI ADKASN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle