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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71146020, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKPQFISAI SLLLISSQLM AQTTLIKNVN GYTFTDNSLT QFSAISFTDD IINKVYPIGA  60
   61 VLPASKGVIV IDGQGQTMLP GLIDAHGHVI GYGHSLLRVD LVNATSELDA VNRTISYAKD 120
  121 NPSMSWILGR GWNQVQWSNN SYPNAKSLDE AFPNKPVWLR RVDGHAGWAN SKAMALAGIT 180
  181 SASKAPVGGD IIKDKNGLPT GIFIDNAMTL ITASITPPSP MEDKIALKRA MHSLASLGLT 240
  241 SVHDAGIEQK DIALYKTLAS EGNMTIRING MLYLPSTNWQ QQLEQGPYRT EDEMFAVNSV 300
  301 KIQADGALGS RGASLINDYS DHSGHKGLLL HDKKSLQHYI DFAMNAGFQV NTHAIGDNAN 360
  361 KLILDLYQQA IQKSQTKALR HRIEHAQVLR LEDISRFSSL NVIASMQATH ATSDKNMAVT 420
  421 RLGGKRILGA YAWRKLLDSN TIIAAGSDFP VESPNPFFGL HASITRQDHK DLPIGGWYAD 480
  481 QKMTRTEALR SFTIDAAYAG HQEKLIGSLE AGKKADFILL ADDLLTMPES TIWQSQVSQT 540
  541 WVAGKKVFSA IDVPSVE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle