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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71145977, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKTSPPMNK LKLNIALSAF FFALVGCQSM PNDPVDIKAD LDASIKETKR LNGPKALTQV  60
   61 PNSVQQELML NNMDQAKQGM LAEKRLEVSA TEVDAKDFFQ AIVRGSRYNV VIHPDVTGQI 120
  121 SLSLNNVTLS EALTVVEDVY GYEIIRRGNV VKVFPPGIRT ETIALNYLFL KRFGSSSTTI 180
  181 NSGGVSENDP NSGNSSNGNS SNSNNSNSGS NNNQSGNNGS SNQNSGINLY TENESNFWDE 240
  241 LKESLTAFVG TGEGRSVIVS PQAGLVTVRA LPQELTAVKK FITATESHLH RQVIIEAKIM 300
  301 EVTLNDDFQQ GIKWNKVLDQ VGSADIIYST TGNVVGNVIS NTIGGVNSIN FSKQTSGSDF 360
  361 SGVIELLQTQ GNVQVLSSPR ITATNNQKAV IKVGEDEYFV TEVSSTTTTG TSTTTTPEVE 420
  421 LTPFFSGIAL DVTPQISKDG SVILHVHPSV TITEEQSKTI KIGDTTLVLP LAQSSVRESD 480
  481 TIIRANSGEV VVIGGLIETY NIDIESKTPI LGDIPYLGEL FKNKSQKSQK RELVIMLKPI 540
  541 VVGQDTWKNQ LQDARSLLTK WFPEEVDACE LSNDGTLTQE CQAQCADAEY ATEHGVCQMA 600
  601 AQNAASNDN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle