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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71145516, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFFTELKRR NIFKVASVYL LTTWLVLQII AVISPSLNLP IMFGTIVTVV LIIGFPISCV  60
   61 IAWAFELTPE GMKFTKDVEE DESIRQETGQ KLNASLMFII ALLISFIVYD KFFTFQINEK 120
  121 LDLTIAVLPF KDMSPGGTQQ YFGDGIAEEI LNSLTKISSL KVIARTSSFQ FRNEKKDINQ 180
  181 IGKQLGAQFI LEGSIRKSED KLRVTAQLID ATTQHHIWSE TYDKKLTDVF VLQDQLTFAI 240
  241 TQALKLNILK GDLQSSALAK SDNPEAYKLY LKSLPLFHQR TPSGIKDAEK LLEKAIELDH 300
  301 DFLLAKAQLY NLYARYNRYI RALNIEQQKN AELLIRDLLS SPEKFAEKSM AIGMWLSGEG 360
  361 YNVQSIEYFK HSVSEFPSSS ELKFIYAYYA NIYSHLSRND IIEMHKSVLS KDPLNTSSRS 420
  421 NLMSLYQKEN RLAEMREVID KGRELQPQHI QSIRDEIFGL IAENNISSAF KIIKKSNDDN 480
  481 LKYYRNSLGS FFNEITFEQA LKIGDDYLIA VELAKLVRDK GIQYQEVDFG HMDNLRTKSI 540
  541 TLFSKSLLGD IKDVNSYVEN EQHFVGFIEG VIPNLNNKLD YSIYAIYLNE KLKNSMDFES 600
  601 YNQTLIEHGY ENCNGYPALV EKCFTYNILS GQYTAKEIVA LMLKNKGVII LPINIAMLPL 660
  661 IETNYWYSTI ANEPEFINLV KSALKN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle