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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71145203, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKFIAKGIL ALILATLSNV TLSEDIDLYI SEAVRQANKK TKVLIIFDTS GSMKEISRFG  60
   61 EPYINDPDNP YIATDSAHAY DDNMLYFNRA GADNTTTIPN SPSDVRRFTG ALNGCFTSIA 120
  121 SLAENGTYTD YMREYRSQDN EWQEVRNNSG ADPVVIDCRN DAYYLQYDEN GEIVVGNEGS 180
  181 RNNASGFLSG YPIDGEGTSQ NPIYYDNRVP AQHTNVDWYT SDGLITLYTA NYLRWYHGQS 240
  241 TASHLEERLQ TAKNSIRDVI NSTPLVEFGL EVFNFNYGDD DTSGNGGRIA AGIKEMTDDN 300
  301 RANLLNIIAN QISAEGSTPL CESVYEASQY FAGALVDYGD DDIDVRDYNY SKNIPPMATD 360
  361 ITEVVDGHNV YKTPFEDCAS SVANIILITD GAPQHDFAAD SKITAMVTTV QRANDTDGNP 420
  421 VYESLTFTGA HTEALTDETN TFDGSAYPSG NRTSDDSYLP ALASWMSEYD INLNRAGKQT 480
  481 VVTHTIGFSN GAIAARGLLE ETARRGKGQY VDADTGTSLI AALENILDNL PEANDSLTSA 540
  541 SVSANSYLNN QTLDSVYYGM FEPSMGARWQ GNLKKYKVVN EKITGVGADG NGDGVDVICD 600
  601 VDGSSSFCDT ARSFWSTEAD GNVVGQGGVL TWFNSHIPSD RKLYMENGDG ASALMTFNRT 660
  661 NLEAAFTAAS TSLAAALGVT DADATIQSTA IDEMLAWATG LDVDDEDEDT ATDDMRKSVF 720
  721 GDPLHSKPLV VNYGGRVYDE DTNTYSGEDD IRIVIGTNSG ALHMFKDNDT SVAESWAFMP 780
  781 TEFINNIKPL RTSPASANKI YGIDGEISIY QDDKNGDGII GAGDTAWIFF GLRRGGSSYY 840
  841 ALDISSPDAP KLLWRIDSSK PNFTQLGQSW SQPKIGYSAL NFTTGTGSTA KPVLFIGGGY 900
  901 DTKKDSTGVA TPDDKGQGIY MLDAATGGLL WSGLPTGGTT AFPGEHSIPS PIALLDSTGD 960
  961 GLIDRLYTGD TGGNVWRVDM PGKETSDFSI SQLASLGGGV NDQRFFYEPT IARALISEIV1020
 1021 KTEVTDADGV TTEVFVHQEI PYDAILLGSG DRTTPLGKDT TDTLYMIKDS NIITKTFPSR1080
 1081 PDEDAMDLIA KTDLYNYTTN PFDAATDDTA KYDLQKLASE ESGWYIDLRA TGEKSTASAL1140
 1141 VIKGVAYFTT YTPASSSVLI SCIPPKGSGE LYAVDLALGT RRNLTQTEVR DNDDRVIKIN1200
 1201 NDWLGPPTLI MLPETDNDDT TVDPITGDII VGDKVISVDF SLATVRTYLY STEVQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle