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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71279252, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSILKVILL SVCTLSSINI LQANDSLQIL TDVGQQRIFL KAEKLLVKSN SQQYQSLYNQ  60
   61 LYYYPLQPYL DQRRLIENMQ LSSAGEIATF LEKHQHSPLD WPLRKAWLMF LAKKNKGALF 120
  121 LEFYQSTRNN VLTCHKLNFS LEAGLPSNVV LPQVTKLWLV GKSLDKVCDP IIEQWQQAGY 180
  181 RTDEIVWQRI GLAADGGKHT LIPYLTNLLP KDQQYLGRLW HQVRRDPATV TRQYKFIKKS 240
  241 TKESQIYTYG IKRLIWRDPD KALASFKKAQ QIFTFSTTQH QQIVAKFAVA LASKNHPQAR 300
  301 IWLEKLDPLN IDSNIMQWQL TEVLKQQNWQ LVLKELATMP EKYKAKLQWR YWYARALIAT 360
  361 DDLEHGQDVM NELSSKRHYY GFLAASYLET PVSLQDSPLA ITSQEKNAIL LHPSAKRAFE 420
  421 FYYLGRYVKA RREWRYWLTQ LNNREKLVAA KLANENGWFD RAIFTLSKVG YMDDVELRFP 480
  481 KAFDKKINQH AKKQAINPAW AFAIARRESS FMTDARSPVG AKGLMQLMPN TAKQLKRGSV 540
  541 SRQYLYNADN NIKLGTKYLR KLLDKNKGNQ ILATASYNAG PHRVKGWLKN SHAMPADIWI 600
  601 ETIPFKETRN YVKSVLAYQE IYQHKPGQVS QIFEQVINMS IGD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle