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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71144864, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIKKNIFTM IWTTLSVVIF TLTQLSICQA EQVSEEPIAN IPEVVEQKIV IRNITFVDPA  60
   61 KKKKSTTANL VITNKLFDLV TQDDIDVGHG DIIFDAQNGF ILGSLESGKI ANFLILDVDP 120
  121 HENIEALLDT KKHVLLAIHN GVIIRNNLRA ESNISALAEQ KRVKPKRTGW LSYTPPPIVL 180
  181 PSNYKDADWI KFDNDYFSTI LIGALALDRQ SWESQDKDSL AQVGDLQDFN GGEIRALRFG 240
  241 IAGAIKFDKP WIYMITGATN TFDKGFDTNT TDNVSFMDWR LDIPTIYNTT LSIGKQKEPI 300
  301 SMERLMSMTF LPMQERALVS DALLPSRNFG AVLSGITLNQ KLTWAGGVFN NWIEDEGSLS 360
  361 ENSTELVGRT TWLPYLSEDE NELIHLAFGL RYSNAKEGLR YASEPEFNKS TTFVDTGNID 420
  421 ADNSVTYNLE ASWRKGPVWL IGEYTKSKVA ADYLQNPELS GYHVSAVFSV TGEMREYNKR 480
  481 SGTFSPLRVA RSVEQGGWGA LEVSTRWSVF DGSDGGLAAG DTSILSVGFA WWLTPKFNVN 540
  541 FNYRWIDLDR CSFISEACNL QGRSSGFNTR LALFL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle