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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71278905, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLGTVLISS LVNQVSAQEV PDIGYESDTI EHIAVSGRPM SDIEKPSTAA TKMDVSIKDT  60
   61 GRSMMELDAD DLKMRALQDV REAFNYVAGF RANGPADRTY IARGFSTSID NVMVDGLRSL 120
  121 QGGEGGTGSK LPSTFNAENT TFLRGPEAIL YGAGVAGGLI NITSKKPQTT AKTSIGLNNR 180
  181 SYASSDTGNF KRNDTSFNLD STGPITDESV LYRVLAQYTP SGDHFQDGRE IEELLLDAAL 240
  241 SFELGENTTI LPRFERTDRK RTGGSGYADG VFESTFASGE VTTYGKPINR GKYYGSPIDV 300
  301 GENESTSASV LIKHQIAEDW KLAANFRHNE TTSNALDLYI SDSSALENEV GKDLVNRKWV 360
  361 YSAGDDSYNL FDINFEGKVE TGSIKHHLLA GYNYRDMDIK FARSFQDSAD AVGKNPISAS 420
  421 NPDQQVTGPI PDGLVDSPAK PRTQTDTNIY LKDRISIGNT TIAAGLAYVK QDQEELSSGE 480
  481 TIASSFDDTL WDLGVVQKIN RDINVFATYS RAYEPVKGRY IIEYGNGKTD YKPVEGNNYE 540
  541 LGIKGDLLNN NLTAAVTLFA LDRSNSTKFN RGDDGWELLQ LDGKSFESKG VEVDAAMYFS 600
  601 PKFNSSLSYA YTDAHDTVGD DKGVQSNNTP KHAVSLWNNY TFDKNISFAL GLRYESERND 660
  661 GDYKIKSYFE ADVGAYYKTD DWDAALVVNN VLDKNRVEAG ANWVTVQPNT PRAVNLSLNY 720
  721 HF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle