YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68347805, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVKKRGLGR GLDALLSGPT VSALEEQAVQ ADQRELQHLP LDLIQRGKYQ PRRDMDPQAL  60
   61 EELANSIKSQ GVMQPIVVRP IGGGRFEIIA GERRWRASQQ AGQETIPAMV RDVPDETAIA 120
  121 MALIENIQRE DLNPIEEAVA LQRLQQEFQL TQQQVAEAVG KSRVSVANLL RLIALPEVIK 180
  181 TMLSHGDLEM GHARALLGLP ENQQVEGARH VVARGLTVRQ TEALVRQWLS GKQEPAEPVK 240
  241 PDPDIARLEQ RLAERLGSAV QIRHGKKGKG QLVIGYNSLD ELQGVLAHIR

Type	Start	End	Confidence
Signal Peptide	1	23	0.91
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	290	0.99