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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|70885521
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSRVAAVKA PRIHNRRRGT GSSGRRREGR ESEPQRPNVS RRVFTSAVLL LLFFLACAAA  60
   61 GPVQAQNYGT RVGDSYGRHS LEQLQRGHQA ANPPIPGHIF RNPHLVNVNG MLLAIAGAQF 120
  121 NRTVGSGSAS MQLMAHISVD GGRTWRSYAG PEDLDAFAAS PHRMSFPSSF GPLGSIFAFV 180
  181 EGCDLRKGVR PHYANRWGGS GVESVIHFLE TGPRRSGGLS MSSVSMSIRL PYPHKSGDMI 240
  241 GFLNDASTPI TKMTDGTLVF PVQFLTMGGD TASTIMYMNP GQQHWTFANS ATHAGCIEPS 300
  301 ILEWEAGKII MITSCKYGRR RVYESTDKGN TWTEAVGTLS RVWSNPLAGS GLHIQGGFIT 360
  361 ATIDGKKVIL LTQLEYFGDK ERSEIHLWLT DTNRIYQVGL LPTGNSATSS SLLYANDKLY 420
  421 CLYEASVGSD SVPYPLDLTL ELQRIRHALS TWAVKDNALR QCGLMASGAA LSRGNCSVPI 480
  481 PMAGLVGHLA DTLRGDKWED EYLGVNAVVR GAAKKAPSGW TFEGHDAGAE WPVGKQWPKM 540
  541 PFHFANYGFT LAATVSIHEV PKGITPLMGL KKMGKTTLLG LSYDNNMEWS VEHELFPKHF 600
  601 TAWELDKTYH VVLKMHDGVG SVYVDGTLLW NMSLRNSFNE GLDAVSHFYF GAYDEQLSSG 660
  661 KIHATVANVF LYNRPLNETE IGALNANKVT IPPPERKSAK ASTATSPSVE SANDRVNTNT 720
  721 QPTVPAPTPA APQPTEQATL NTSSVPSGGA PSTPAEPKSA GPKPAEPKSA GPKPAEPKSA 780
  781 EPKPAEPKSA EPKPAEPKSA EPKPAEPKSA EPKPAESKSA EPKPAEPKSA EPKPAESKSA 840
  841 EPKPAEPKSA EPKPAEPKSA EPKPAEPKSA EPKPAEPKSA EPKPAESKSA GPKPAEPKSA 900
  901 EPKPAEPKSA EPKPAEPKSA EPKPAEPKSA EPKPAEPNSA EPKPAEPKSA EPKPAEPKSA 960
  961 EPKPAEPKSA EPKPAEPKSA EPKPAEPKSA EPKPAEPKSA EPKPAEPKSA EPKPAEPKSA1020
 1021 EPKPAEPNAA TSSAREGTAD QPASATFSDG HEAVTSVIFS SAAITDVGAS SSDDAQTVGT1080
 1081 EGGAVMQADQ PTQFSVGTPD AANAATHNAE RKGQEGLHPQ VKEAEAATLS SSL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle