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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|70878103
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPRVAAVRA PRTHSCRGVN GSSGRRREGR ESEPQRPNMF RRVFTSAVLL LLFVLTCAAA  60
   61 GSVQAQNYGT GVGDSYGRHS LEQLPREYPV ANTAAAGHIF RNPHLVNVDG MLLAIVGAQF 120
  121 NGSVGSGSAS MQLMARISVD GGRTWRPYAG PEDLDVFAAR LHQMLFTTPY RLFGSLFAFV 180
  181 EGYDLRNGAR IRFTDEWGGS GVESVIHFLE TGPRRSGGFS MNSVSMSIRL PYPYKSDELI 240
  241 GFLNDASTPI TKMTDGTLVF PVQFLTKGGN TASTIMYMNS VQQRWTFAKS ATDAGCTNPS 300
  301 ILEWEAGKII MITSCEYGRR RVYESTDKGN TWTEAVGTLS RVWSNSLAGL GLHIQGGFIT 360
  361 ATTDGKKVIL LTQLEYSRHD GKNEIRLWLT DTNRIYQVGL LPTGNSATSS SLLYANNKLY 420
  421 CLYEAGVGSN SGAFFLDLTS ELHWIRHALD TWAAKDNALS RQCGLMASGA ALSRGNCSVP 480
  481 IPTTGLVGHL ADRLRGDKWE DEYLGVNAVV RGAAKKAPSG WTFEGHDAGA EWPVDKQWSN 540
  541 RPLHFANYGF TLAATVSIHE VPKGITPLMG LKRMRTKTLL GLSYDNNMEW SVVHGSYQNY 600
  601 FAKWELDKTY HVVLKMHDGV GSVYVDGKSL LNLTLPRPSD ELMDEISHFY FGAYDEQLSS 660
  661 GKIHATVANV FLYNRPLNET EIGALNANKV TIPPPKSAEP KPAEPKSAEP KPAEPKPAEP 720
  721 KPAEPKPAEP KPAEPKPAEP KPAEPKPAEP KPAEPKPAEP KPAEPKPAEP KPAEPKPAEP 780
  781 KSAEPKPAEP KPAEPKPAEP KPAEPKPAEP KPAEPKPAEP KPAEPKPAEP KPAEPKPAEP 840
  841 KPAEPKPAEP KPAEPKPAEP KPAEPKPAEP KPAEPKPAEP KPAEPKSAEP KPAEPKPAEP 900
  901 KPAEPKPAEP KPAEPKSAEP KPAEPKPAEP KPAEPKPAEP KPAEPKPAEP KPAEPKPAEP 960
  961 KPAEPKPAEP KPAEPKPAEP KPAEPKPAEP KPAEPKPAEP KPAEPKPAEP KPAEPKPAEP1020
 1021 KPAEPKPAEP KPAEPKPAEP KPAEPKPAEP KPAEPKPAEP KPAEPKPVEP KAAEPKPAEP1080
 1081 KSAEPKPAEP KPAEPKPAEP KSAEPKPAEP KPAEPKPAEP KPVEPKPAEP KPAEPKPAEP1140
 1141 KPAEPKPAEP KPAEPKSAEP KPAEPKPAEP KPVEPKPAEP KPAEPKPAEP KPAEPKSAEP1200
 1201 KPAEPKPAEP KPAEPKPAEP KPAEPKSAEP KPAEPKPAEP KPAEPKPAEP KPAEPKPAEP1260
 1261 KSAEPKPAEP KPAEPKSAEP KPAEPKPAEP KSAEPKPAEP KPAEPKSAEP KPAEPKPAEP1320
 1321 KPAEPKPAEP KSAEPKPAEP KSAEPKPAEP KPAEPKPAEP KSAEPKPAEP KSGEPKPAEP1380
 1381 KPAEPKPAEP NAATSSAREG TADQPASATS SDEHEALASV TSSSVAITDV GASSSDDAQT1440
 1441 VGTEGGAVMQ ADQPTQFSVG TPDAANAATH NAERKGQEGL HPQVKEAEAA TLSSSL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle