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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71413651
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSRVAAVMA PRTHNRRRVT GSSGRRRGGG ESEPPRPNMS RRVFASAVLL LLVVMMCAAV  60
   61 GPVQAQNRGK RVGDSYGGHS SESLSREHRA ANPAVPGHIF RNPHLVNVDG MLMAIVGAQF 120
  121 NGSVGSGSAS MQLMAQLSLD RGVNWSPYSR PGDVDAFAAR LHQMLFTTPF RLFGPLFAFV 180
  181 EGYDLRNGVR PHYPDERGGS GVESVIHFLE TGPGRSGGFS MSSVSMSIRP PYPYKSDGLI 240
  241 GFLNDASTPI TKMTDGTLVF PVQFLTMGGS TASTIMYWNS GQQHWTFANS ATHAGCTNPI 300
  301 ILEWEAGKII MITSCESDRR RVYESTDKGN TWTEALGTLS RVWSNSLAGL GLHIQSGFIT 360
  361 ATIGGKKVIL LTQLEYSRHD SKGEIRLWLT DANRIYNVGL LATGYGATSS SLLYADDRLY 420
  421 CLYEASGGSD SGAFFLDLTS ELQRIRHALD TWAAKDNALG KCSSIASDAA LSRWGCSVPF 480
  481 PTAGLVGHLA DRFSGHKWED EYLGVNAVVR GATKKVPSGL TFEGQGAGAE WPVDKQWPTR 540
  541 PLHFANYGFT LAATVSIHEV PKGITPLMGL KRMGTTTLLG LSYDKNMEWR VVNDLFPKHF 600
  601 TAWEVDKTYH VVLKMHDGVG SVYVDGTLLW NMRLKNSFNE GLGTVSHFYF GAYDEQLSSG 660
  661 KIHATVANVF LYNRPLNETE IGALNASKVT IPPPERKPVP AAAATSSSVE PANERVTTNT 720
  721 QPTVPSPATA GPQQTDQTTL NASSVPSGGA PSKPAEPKSA EPEPAEPKSA GPKPAEPKSA 780
  781 EPKPAEPKSA EPKPAEPKSA GPKPAEPKSA EPKPAEPKSA EPKPAEPKSA EPEPAEPKSA 840
  841 EPKPAEPKSA EPKPAEPKSA EPKPAEPKSA EPEPAEPKSA EPKPAEPKSA EPEPAEPKSA 900
  901 EPKPAEPKSA EPKPAEPKSA EPKPAEPKSA GPKPAEPKSA EPKPAEPKSA EPKPAEPKSA 960
  961 EPKPAEPKSA EPKPAEPKSA EPKPAEPKSA EPKPAEPKSA EPKPAEPKSA EPKPAEPKSA1020
 1021 EPEPAEPKSA EPKPAEPKSA EPKPAEPKSA GPKPAEPKSA EPEPTEPKSA GPKPAEPKSA1080
 1081 EPEPAEPKSA EPKPAEPKSA GPKPAEPKSA EPKPAEPKSA EPEPTKPKSA GPKPAEPKSA1140
 1141 GPKPAEPKSA EPKPAEPKSA EPKPAEPKSA EPKPAEPKSA GPKPAEPKSA EPEPAEPKSA1200
 1201 EPEPTEPKSA EPEPTEPKSA EPKPAEPYSA EPEPTEPKSA EPKPAEPKSA EPEPAEPKSA1260
 1261 EPEPAEPKSA EPKPAEPKSA EPEPTEPKSA GPKPAEPYSA EPKPAEPKSA EPEPTEPKSA1320
 1321 EPEPTEPKSA GPKPAEPYSA EPKPAEPKSA ELNATTPSAR EGAADQSASV TSSGASSTDV1380
 1381 GASSSDDAQT VGMEGGDMMQ ADQPVQFSVG TPDAANAATH NAEGKGQDGL HPQVKEAEAA1440
 1441 TLSSSL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle