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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71407532
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKTVVGASR MFWLMFFVPL LLALCPSEPA HALAPESSRV ELFKRQSSKV PFEKDGKVTD  60
   61 RVVHSFRLPA LVNVDGVMVA IADARYETSN DNSLIDTVAK YSVDDGETWE TQIAIKNSRV 120
  121 SSVSRVVVPT VIVKGNKLYV LVGSYNSSKS YWTWQPDGSD WDILLAVGEV TKSTAGGKTT 180
  181 ASIKWGSPVS LKKFFPAEME GMHTNQFLGG AGVAIVASNG NLVYPVQVTN KRKQVFSKIF 240
  241 YSEDEGKTWK FGKGRSDFGC SEPVALEWEG KLIINTRVDR ARRLVYESSD MGNTWVEAVG 300
  301 TLSRVWGPSP KSDQPGSQSS FTAVTIEGMR VMLFTHPLNF KGRWLRDRLN LWLTDNQRIY 360
  361 NVGQVSIGDE NAAYSSVLYK DDKLYCLHEI NTNEVYSLVF ARLVGELRII KSVLQSWKNW 420
  421 DSHLSSICTP ADPAASSSER GCGPAVTTVG LVGFLSGNAS QNVWEDAYRC VNASTANAER 480
  481 VPNGLKFAGV GGGALWPVSQ QGQNQRYRFA NHAFTLVASV TIHEVPSVAS PLLGASLDSS 540
  541 GGKKLLGLSY DKKHQWQPIY GSTPVTPTGS WETGKRYHVV LTMANKIGSV YIDGEPLEGS 600
  601 GQTVVPDGRT PDISHFYVGG YKRSDMPTIS HVTVNNVLLY NRQLNAEEIR TLFLSQDLIG 660
  661 TEAHMDSSSD SSAHGTPSTP VDSSAHGTPS TPVDSSAHST PSTPADSSAH GTPSTPVDSS 720
  721 AHGTPSTPVD SSAHSTPSTP VDSSAHGTPS TPVDSSAHGT PSTPVDSSAH STPSTPVDSS 780
  781 AHGTPSTPVD SSAHGTPSTP VDSSAHSTPS TPVDSSAHST PSTPADSSAH GTPSTPVDSS 840
  841 AHGTPSTPVD SSAHSTPSTP VDSSAHSTPS TPADSSAHGT PSTPVDSSAH STHSTPVDSS 900
  901 AHSTPSTPVD SSAHGTPSTP VDSSAHGTPS TPVDSSAHST PSTPVDSSAH GTPSTPVDSS 960
  961 AHGTPSTPVD SSAHGTPSTP VDSSAHSTPS TPVDSSAHGT PSTPVDSSAH GTPSTPVDSS1020
 1021 AHSTPSTPVD SSAHGTPSTP VDSSAHSTPS TPVDSSAHST PSTPVDSSAH STPSTPVDSS1080
 1081 AHSTPSTPVD SSAHGTPSTP VDSSAHGTPS APVDSSAHST PSTPVDSSAH STPSTPVDSS1140
 1141 AHGTPSTPVD SSAHSTPSTP AGNSATRMFL ILPDGAAISA FSGGGLLLCA CALLLHVFFT1200
 1201 AVFF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle