YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|126632585, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWFSWMLLLA TLASSSASSR TREWAHHGAM MFADLTPQEM YAVRDYLYSC SELGLTSARG  60
   61 TSLKKNSILL MELHVPRKHE ALRALDKGQA KPSRQARVVV QFGNQAVPNV TEYIVGPLPF 120
  121 PKTYHLKTFK NNKNIRFESR PISAVEYEHL SGVLDKVGSK VNKILQESTG FTYGNCTKRC 180
  181 LTFSDIAPRG LTSGERRTWI MLQKFVEGYF IHPVGFEVLV NHKDLDHEKW TVEKVWYNGQ 240
  241 YFDSLDEFVE KYEKGTVDKI KLPEHDEEDL FSTYIPRGDM NTRTNIHGAK LVEPQGRRFQ 300
  301 VDGNFVEYAG WSFAYRVRSS AGLQIFDLRY NGERIAYEIA LQEAIAFYSG DTPAAMQTKY 360
  361 IDAGWAMGTS DYELSPGIDC PEIAHFVDLY HYYDTDKPVR YRNALCIFEM TTGIPLRRHF 420
  421 NSNFQGGYNF YGGLENHVLV IRTTSTVYNY DYIWDFVFYQ NGVMESRVSA TGYIHATFFT 480
  481 ENGLNYGTRV YNYVLGNLHT HLIHYKVDLD ISGRENSFES IDLKYVNFTN PWSPGHTIMQ 540
  541 SKLHRTQYET ERSAAFRFGK KFPKYLHFYN PNQLNKWGHK KGYRIQYNSH ANSVLPRGWR 600
  601 EENGIPWSRY PLAVTRHKDS EVTSSSIYTQ NDPWEPLVSF EEFVRNNENI VNQDLVAWVT 660
  661 VGFLHIPHSE DVPNTATPGN SVGFFLRPFN FFNEDPSLAS RSTVIVRPDE KGQPKVQRWT 720
  721 PEVVGHCVSD KPFFYNGTYA GV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle