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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68394715, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAWLTFLIA FFTTVLTQIF GSGVFELDLH EFKNFKGLLA NGNSCTPDCR TFFRVCLKNY  60
   61 QVVVSPGDCI FGSALTPVLG TNSFRIMGGG SFSTPIRLPF NFGWPGSFSL IIEAWHSPYS 120
  121 DLPVDAYNPN MQISFFAIQR KLEVGAEWSQ DVQSGKQTEL RYSYRFICNE NYYGDSCSKK 180
  181 CTPRDDRFGH YTCNPDGQLS CLPGWKGEYC EEPICLEGCS EANGNCSKPG ECVCREGWQG 240
  241 KFCTECKTYP ACKHGTCHLP GQCNCKEGWG GLFCDQDLNF CTHHKPCVNG ATCMNTGQGS 300
  301 YTCICRPGYT GVNCELQVRE CDSSPCKNGG LCTDHDKSYT CTCLPDFEGT HCEHSLLTCA 360
  361 DSPCFHKGRC HEKDNGRSYA CECPLGYTGL NCERRMDKCT SMLCANDGLC LILGGKRICS 420
  421 CRAGFTGQRC EININDCANN PCANGGTCYD RINEYVCSCP PGYKGRNCDR PSCLSTPCLN 480
  481 GGSCVGITGN PPACFCPSGF TGPLCEYYAV TAPVTRGETQ DRFQWAAVSL AVGLVALVVL 540
  541 LCMVVIALRH IHRQASGERT RGEAMNNLSE SQRDNLIPTS QLKNTNKQVS LEVDCTPDKS 600
  601 NYIHKNCHLD YNSSKEFKDI VSQEDKSSHK YEKCLEEKIP LSRMYREKPE CRISTICSPR 660
  661 DSVYQSVFVI AEERSECVIA TEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle