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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68366904
Protein type: Globular with Signal Peptide
Type Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTASFPHTL FLVFADSFRK DAECFSPACA ELSWPSVKEV IYMLHSSKCL REIERGSPSD  60
   61 FYSGTALCNQ CLLLGERGVL VFWRQVQIQT TKIVGPFFIN GNLKATGYLK LLHDGVFPSL 120
  121 CTKSGTFTEF FQQDGAPTHY GCQVRAFLRQ GVAVAQQAQG QSRRLTIMDV DEEENMSSCS 180
  181 TDVKENRNLD NVSSKEGAGL VEQLPNGSGG GGRKRPLEEG NNGHSHSKFR PKKRKKTPGP 240
  241 VLPKNALMQL NEIKPGLQYK LLSQTGPVHA PVFVMTVEVN GQLFEGSGPT KKKAKLNAAE 300
  301 KALRSFVQFP NASEAHLAMG RTLTVNTDFT SDQADFPDML FNGFETPAPP EETFFLGSNG 360
  361 NGSLNPLGEY PVPQAAGTNS LVQAPLPPPS SFASSASGKN PVMILNELRP GLKYEFVSES 420
  421 GESHAKNFVM SVTVDSQMFE GSGRNKKLAK ARAAQAALSS LFNMQLDQTP SRQPIPREGL 480
  481 QLHLPQVLAD AVSRLVVDKF SELTDNFTSP HARRKVLAGV VMTTGTDVKD AQVICVSTGT 540
  541 KCINGEYMSD RGLALNDCHA EIIARRSLIR YLYMQLEHFL SNNKEEHQKS IFMQCEKRGY 600
  601 RLKDSVQFHL YISTSPCGDA RIFSPHEAGV EDQGDRHPNR KARGQLRTKI ESGEGTIPVR 660
  661 SSNTIQTWDG VLQGERLLTM SCSDKIARWN VVGIQGSLMS YFSEPIYFSS IILGSLYHAD 720
  721 HLSRAMYQRI ADIEDLPQQF SLNRPLLSGI SNAEARQPGK APNFSVNWTV GDQALEVINA 780
  781 TTGKDDMGRA SRLCKHALYS RWVRLHSKLS PTLRIKVPKP SSYHEAKQAA VEYHTAKQTL 840
  841 IKAFHKAGLG AWVKKPIEQD QFSLNS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle