YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FSTA_DANRE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRMLKRQQL HPGMILLLFW LCYLIEDQKV QAGNCWLQQG KNGRCQVLYM PGMSREECCR  60
   61 SGRLGTSWTE EDVPNSTLFR WMIFNGGAPN CIPCKETCDN VDCGPGKRCK MNRRSKPRCV 120
  121 CAPDCSNVTW KGPVCGSDGK TYRDECALLK SKCKGHPDLE VQYQGKCKKT CRDVLCPGSS 180
  181 TCVVDQTNNA YCVTCNRICP EVMSPDQYLC GNDGIVYASA CHLRRATCLL GRSIGVAYEG 240
  241 KCIKAKSCDD IHCSAGKKCL WDAKMSRGRC AVCAESCPES RSEEAVCASD NTTYPSECAM 300
  301 KQAACSLGVL LEVKHSGSCN CK

Type	Start	End	Confidence
Signal Peptide	1	32	0.90
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	322	0.99