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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|148726406, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPSTRKDFV SLTLSESGSY SNSKQWRRQS CWRKWKQLSR LQRSLILLTL MLLLVCGIAT  60
   61 SPTLIGHWRG MNGDDVKNSF VVDLKNEYRS ILPEPPSERK DFDRRGAFGL EKLLQGKVNV 120
  121 SGVLGDQNHG LDLKNADKGS EGQKPIISWR GAVIEEEQAS DTDTKDTENQ GDPASLALAE 180
  181 SRLEAVREAF RHAWKGYKDF AWGHDELKPI SKSYGEWFGL GLTLIDALDT MWILGLQEEF 240
  241 AEAREWVAKE LSFDKNVDVN LFESTIRILG GLLSTYHLTG DNLFLDKAKE IGFRLMPAFS 300
  301 TPSKIPYSDV NIGKGTAHPP RWTSDSTVAE VTSIQLEFRE LSRLTGDPKY KLAVMEVMKQ 360
  361 VHKLDGKQDG LVPMFINTNN GLFTHQGIYT LGARADSYYE YLLKQWIQGG RIEQELLEDY 420
  421 LQAVEGVKKN LLKKSTPLGL TFVGELSHGH FSPKMDHLVC FLPGTLALGV HYGLPADHME 480
  481 LAKQLIETCY QMYAQMETGL SPEIAHFNMH DGSTQDVDVK IADRHNLLRP ETVESLFYLY 540
  541 RLTRDKKYQQ WGWEILQNFN KYTRVPTGGY TSINNVRDPS YTSPRDKMES FFLGETLKYF 600
  601 YLLFSEDPTL ISLDKYVFNT EAHPLPVWPQ AE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle