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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|66512450
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQSREVLAM MDAHTTTFGR KRGCTVSPCG AFLLGAAFLI SLVVTGLLVY HLAPCLEEKL  60
   61 DKSCNNASNS VSSRAFPTDT FGKKKLDVRL PRSIVPVSYE LRLVPFIQVG NFTFNGEVKI 120
  121 LVNVTEETDK VTLHAVDMRI DESFTNIKSY SAVKSAGEKV VKIVEQRNDT ERQFYVIRTL 180
  181 DTLRKGAQYI VNLKFVGHLN DYLQGFYRSS YTVGSETRWI ATTQFQPTDA RRAFPCFDEP 240
  241 ALKATFKISI ARPKNMTSIS NMPQMGEPMP VPGLPTYVWD HYERSVPMST YLVAFIVSDF 300
  301 EMLKSESGKF RVWARSEAVQ QARYTLDIGP KILRYYEDYF KIKFPLPKMD SVALPDFSAG 360
  361 AMENWGLITC RETAMLYQEG VSTSSNQQRV ATVIAHELAH QWFGNLVTPS WWSDLWLNEG 420
  421 FASYMEYIGM NAVEPTWKVL EQFVVHDLQN VFGLDALESS HQISVKVEHP DEISEIFDRI 480
  481 SYEKGASIIR MMDHFLTTDV FKQGLTNYLN AKAYQSAEQN DLWDALTKQA HKDKVLDPAV 540
  541 TIKEIMDTWT LQTGFPVVTV TRDYNNGAAT LTQERFMLRN GTMVTTSNVE PLWWIPITYT 600
  601 TESQLDFNTT QPSRWMKAEK SITLTNLNWN SSEWVIFNIQ ETGYYRVNYD KTNWQLIIKQ 660
  661 LNKNSFGNIS TINRAQLIDD ALNLARAGRL DYATALSVTS YLAHETEYLP WKAAFTAMHY 720
  721 LDSMLIKMPS YDRFRVYVLK LLDNVYKQVG FTDNVGDPQL TVFTRIDVLT WACNFGHEDC 780
  781 VQNAVKQFYN WRYTPSPNVN NPISPNLKMV VYCTAIRFGG QVEWDFAWQR YLETNVGSEK 840
  841 DLLHHALGCT RETWLLSRYL DWTITNNSGI RKQDVSRVLN SIASNPVGQP LAFNFLRNKW 900
  901 ARLREYFGTS LLTINNIVKS ATRGINTKYD LKDLIEFTNE HIGEFGSATR SVQQSIEQSE 960
  961 ANIRWVEANH ATIQDWLKRY TA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle