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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62666767, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.69
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFPMWTLKR QSFIFLNMIL VSRVLGFRWY PKTLPCDVSL DSTNTHVIVD CTDKHLTEIP  60
   61 EGIPTNTTNL TLTINHIPSI SPDSFHRLKH LEELDLRCNC VPILLGSKAN VCTKRLQIRP 120
  121 GSFSGLSDLK SLYLDGNQLL EIPQDLPSSL QLLSLEANNI FSITKENLSE LVNIESLYLG 180
  181 QNCYYRNPCN VSYSIEKDAF LVMKNLKVLS LKDNNVTAVP TILPPNLLEL YLYNNIIKRI 240
  241 QEHDFNKLSQ LQVLDLSGNC PRCYNVPYPC TPCENNSPLQ IHDNAFDSLT ELKVLRLHSN 300
  301 SLQHVPAEWF KNMSNLQELD LSQNYLAREI EEAKFLNSLP NLVQLDLSFN YELQVYHASI 360
  361 TLPHSLSSLT KLKNLYIKGY VFKELKDSSL SVLHNLSNLE VLDLGTNFIK IADLNIFQQF 420
  421 ENLKFIDLSV NKISPSEESR EVGLCPNAQT SVDWHGPQVL EALHYFRYDE YARSCRFKNK 480
  481 EPPTFLPLNA DCHTYGKTLD LSRNNIFFIK PSDFKHLSFL KCLNLSGNAI GQTLNGSELQ 540
  541 PLRELRYLDF SNNRLDLLYS TAFEELQNLE ILDLSSNSHY FQAEGITHML NFTKKLRHLE 600
  601 KLMMNDNDIS TSASRTMESE SLRVLEFRGN HLDVLWRDGD NRYLDFFKNL LNLEELDISR 660
  661 NSLNSVPPGV FEGMPPNLTT LSLAKNGLRS FSWGRLQLLK HLKNLDLSHN QLTTVPARLA 720
  721 NCSKSLTKLI LNHNQIRQLT KYFLEDALQL RYLDISSNKI QVIQKTSFPE NVLNNLNMLL 780
  781 LHHNRFLCNC DAVWFVWWVN HTDVTIPYLA TDVTCAGPGA HKGQSVISLD LYTCELDLTN 840
  841 LILFSVSISS VLFLMIVMTT SHLFFWDMWY IYYFWKAKIK GYQHLQSMES CYDAFIVYDT 900
  901 KNSAVTEWVL QELVVKLEDP REKHFNLCLE ERDWLPGQPV LENLSQSIQL SRKTVFVMTQ 960
  961 KYAKTESFKM AFYLSHQRLM DEKVDVIILI FLEKPLQKSK FLQLRKRLCS SSVLEWPTNP1020
 1021 QAHPYFWQCL KNALTTDNHV AYSQMFKETV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle