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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62661681, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRIGISCLF PASWHFSISP VGCPRILNTN LRQIVVISIL AAAVSLLYFS VVIIRSKYGW  60
   61 LSKDKKFQRY LARVTDVEAT DTNNPNVNYG IVVDCGSSGS RIFVYCWPQH NGNPHDLLDI 120
  121 RQMRDKNRKP VVMKIKPGIS EFATSPEKVS DYISPLLSFA AEHVPRAKHK ETPLYILCTA 180
  181 GMRVLPESQQ KAILEDLLTD IPVHYDFLFS DSHAEVISGK QEGVYAWIGI NFVLGRFEHI 240
  241 EEDDEAVVEV NIPGSESSEA IVRKRTAGIL DMGGVSTQIA YEVPKTEEVA KNLLAEFNLG 300
  301 CDVHQTEHVY RVYVATFLGF GGNAARQRYE DRLFASTVQK NRLLGKQTGL TPDAPFLDPC 360
  361 LPLDLKDEIQ QNGQTLYLRG TGDFDLCRET LQPFMNKTNE TQTSLNGVYQ PPIHFQNSEF 420
  421 YGFSEFYYCT EDVLRMGGDY NAAKFTKAAK DYCATKWSIL RERFDRGLYA SHADLHRLKY 480
  481 QCFKSAWMFE VFHRGFSFPV TYKSLKTALQ VYDKEVQWTL GAILYRTRFL PLRDIRQEVF 540
  541 RAGHAHWQGV SFVYNHYLFS GCFLVVLLSI LLYLLRLRRI HRRAPRTGSL WMEEGLPSQK 600
  601 GPGPL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle