YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149063914, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWGLVRLLLA WLGGWGCMGR LAAPVPAWAG SRGHSGPTLL RTRRSWVWNQ FFVIEEYSGP  60
   61 EPVLIGKLHS DVDRGEGRTK YLLTGEGAGT VFVIDEATGN IHVTKSLDRE EKAQYVLLAQ 120
  121 AVDRASNRPL EPPSEFIIKV QDINDNPPVF PLGPYHATVP EMSNVGTSVI QVTAHDADDP 180
  181 SYGNSAKLVY TVLDGLPFFS VDPQTGVVRT AIPNMDRETQ EEFLVVIQAK DMGGHMGGLS 240
  241 GSTTVTVTLS DVNDNPPKFP QSLYQFSVVE TAGPGTLVGR LKAQDPDLGD NALMAYSILD 300
  301 GEGSEAFSIS TDSQGQDGLL TVRKPLDFET RRSYTFRVEA TNTLIDPAYL RRGPFKDVAS 360
  361 VRVAVQDAPE PPAFTQATYH LVVPENKAPG TLVGQISAND LDSPASPIRY SILPHSDPEH 420
  421 CFSIEPEDGT IRTAVRLDRE ARVWYNLTVL ATELDSSAQS SRVQVAIQTL DENDNAPQLA 480
  481 EPYDLFVCDS AAPGQLIQVI RALDRDEVGN SSQVSLQGPV GPDANFTVRD NRDGSASLLL 540
  541 PSRPAPPRQA PYLVPIELWD WGQPALSSTA TVTVSVCRCQ PDGSRAPCWP EAQLSPTGLS 600
  601 TGALLAIVTC MGTLLALVVL FVALRRQKQE ALMVLEEEDV RENIITYDDE GGGEEDTEAF 660
  661 DITALQNPDG AAPPAAGPPV RRDVLPRTRA PRQPRPPGPA DVAQLLALRL READEDPSVP 720
  721 PYDSVQVYGY EGRGSSCGSL SSLGSGSEAG GVPGPAEPLD DWGPLFRTLA ELYGAKEPPA 780
  781 P

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle