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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109467506, gi...
Protein type: Transmembrane
Type Confidence: 0.74
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFLRQIQLL LWKNWTLRKR QKIRFVVELV WPLSLFLVLI WLRNANPLYS QHECHFPNKA  60
   61 MPSAGMLPWL QGIFCNMNNP CFQNPTPGES PGTVSNYNNS ILARLYRDFQ ELFMDTPEVQ 120
  121 RLGRVWTELR TLSQLMDTLR THPERFTGRG LPIRDILKDE ETLTLFLKKN IGLSDSVAYL 180
  181 LVNSQVRMEQ FAYGVPDLEL KDIACSEALL QRFIIFSQRW GAQAVRGALC PLSQVTLQWI 240
  241 EDTLYADVDF FKLFRVLPTL LDSSSQGINL RFWGEILSDL SPRVQKFIHR PSVQDLLWVT 300
  301 RPLLQNSGPE TFTQLMGILS DLLCGYPEGG GSRVFSFNWY EDNNYKAFLG IDSTRRDPTY 360
  361 SYDKRTTSFC NSLIQSLESN PLTKIAWRAT KPLLMGKILF TPDSPAARRL LKNANSTFEE 420
  421 LDRVRKLVKA WEEVGPQIWY FFEKSTQMAV IRDTLQHPTV KDFINRQLGE EGITTEAILN 480
  481 FFPNGPRENQ ADDMTSFDWR DIFNITDRFL RLANQYLECL VLDKFESYDD EVQLTQRALS 540
  541 LLEENRFWAG VVFPDMYPWT SSLPPHVKYK IRMDIDVVEK TNKIKDRYWD SGPRADPVED 600
  601 FRYIWGGFAY LQDMVEQGIV RSQTPAEPPI GVYLQQMPYP CFVDDSFMII LNRCFPIFMV 660
  661 LAWIYSVSMT VKGIVLEKEL RLKETLKNQG VSNAVIWCTW FLDSFSIMSM SIFLLTLFIM 720
  721 HGRILHYSDP FILFLFLLAF ATATIMQCFL FSTFFSKASL AAACSGVIYF TLYLPHILCF 780
  781 AWQDRMTADL KTTVSLLSPV AFGFGTEYLV RFEEQGLGLQ WSNIGKSPLE GDEFSFLLSM 840
  841 KMMLLDAALY GLLAWYLDQV FPGDYGTPLP WYFLLQESYW LGGEGCSTRE ERALEKTEPL 900
  901 TEEIEDPEYP EGMNDSFFER ELPGLVPGVC VKNLVKVFEP GSRPAVDRLN ITFYENQITA 960
  961 FLGHNGAGKT TTLSILTGLL PPTSGTVLIG GKDIEISLDA VRQSLGMCPQ HNILFHHLTV1020
 1021 AEHILFYAQL KGRSWEEARL EMEAMLEDTG LHHKRNEEAQ DLSGGMQRKL SVAIAFVGDS1080
 1081 KVVVLDEPTS GVDPYSRRSI WDLLLKYRSG RTIIMSTHHM DEADLLGDRI AIISQGRLYC1140
 1141 SGTPLFLKNC FGTGFYLTLV RKMKNIQSQR CGCEGACSCT SKGFSARCPA RVDEITEEQV1200
 1201 LDGDVKELTD LVYHHVPEAK LVECIGQELI FLLPNKNFKQ RAYASLFREL EETLADLGLS1260
 1261 SFGISDTPLE EIFLKVTEDS ESGSKFVGGT QQKREHTGLR HPCSAPVEKH RQHAQASHTC1320
 1321 SPGQVDPPKG QPSPEPEDPG IPFNTGARLI LQHVQALLVK RFHHAVRSRK DFVAQIVLPA1380
 1381 TFVFLALMLS IIVPPFGEFP ALTLHPWMYG HQFTFFSMDE PNNEHLEVLA DVLLNRPGFG1440
 1441 NRCLKEEWLP EYPCGNATSW KTPSVSPNIT HLFQKQKWTA AHPSPACKCS TREKLIMLPE1500
 1501 CPEGAGGLPP PQRIQRSTEV LQDLTNRNIS DYLVKTYPAL IRSSLKSKFW VNEQRYGGIS1560
 1561 IGGKLPDIPI SGEALVGFLS DLGQMMNVSG GPVTRESSRE MLDFLKHLET KDNIKVWFNN1620
 1621 KGWHALVSFL NVAHNAILRA SLPKDRDPEE YGITVISQPL NLTKEQLSEI TVLTTSIDAV1680
 1681 VAICVIFAMS FVPASFVLYL IQERVTKAKH LQFISGVSPT TYWMTNFLWD IMNYAVSAGL1740
 1741 VVGIFIGFQK KAYTSTDNLP ALVTLLMLYG WAVIPMMYPA SFLFDVPSTA YVALSCANLF1800
 1801 IGINSSAITF VLELFENNRM LLRFSATLRE LLIVFPHFCL GRGLIDLALS QAVTDIYAQF1860
 1861 GEEYSANPFQ WDLIGKNLVA MAIEGVVYFL LTLLIQHHFF LTRWIAEPAR EPVFDEDDDV1920
 1921 AEERQRVMSG GSKSDILKLN ELTKVYSGSS SPAVDRLCVG VHPGECFGLL GVNGAGKTTT1980
 1981 FKMLTGDTTV TSGDATIAGK SILTNISDVH QNMGYCPQFD AIDDLLTGRE HLYLYARLRG2040
 2041 VPSKEIEKVA NWGIQSLGLS LYADRLAGTY SGGNKRKLST AIALTGCPPL LLLDEPTTGM2100
 2101 DPQARRMLWN TIVNIIRQGR AVVLTSHSME ECEALCTRLA IMVKGTFQCM GTIQHLKYKF2160
 2161 GDGYIVTMKI KSPKDDLLPD LNPVEQFFQG NFPGSVQRER HHSMLQFQVP SSSLARIFQL2220
 2221 LISHKDSLLI EEYSVTQTTL DQVFVNFAKQ QTETYDLPLH PRAAGASWQA KLEGKSGRLE2280
 2281 TQEPLPAGSS EHLANINNPT AVADNKHTRS PQ

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