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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62643818, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELQKGKGTV AAASSGAAGG GGGGAGAGAP GGGRLLLSTS LDAKDELEER LERCMSIVTS  60
   61 MTAGVSEREA NDALNAYVCK GPPQHEEICL GLFTLVLTEP AQAQKCYRDL ALVSRDGMNI 120
  121 VLNKINQLLM EKYLKLQDTC RTQLVWLVRE LVKSGVLGAD GVCMTFMKQI AGGDVTAKNI 180
  181 WLAESVLDIL TEQREWVLKS SILIAMAVYT YLRLIVDHHG TAQLQTLRQK EVDFCISLLR 240
  241 ERFMECLMIG RDLVRLLQNV ARIPEFELLW KDIIHNPQAL SPQFTGILQL LQSRTSRKFL 300
  301 ACRLTPDMET KLLFMTSRVR FGQQKRYQDW FQRQYLSTPD SQSLRCDLIR YICGVVHPSN 360
  361 EVLSSDILPR WAIIGWLLTT CTSNVAASNA KLALFYDWLF FSPDKDSIMN IEPAILVMHH 420
  421 SMKPHPAITA TLLDFMCRII PNFYPPLEGH VRQGVFSSLN HIVEKRVLAH LAPLFDNPKL 480
  481 DKELRSMLRE KFPEFCSSPS PPVEVKIEEP VSMEMDNHLS DKDESCYDNA EAAFSDDEED 540
  541 LNSKGKKREF RFHPIKETVV EEPVDVTPYL DQLDESLRDK VLQLQKGSDT EAQCEVMQEI 600
  601 VDQVLEEDFD SEQLSVLASC LQELFKAHFR GEVLPEEVTE ESLEESVGKP LYLIFRNLCQ 660
  661 MQEDNSSFSL LLDLLSELYQ KQPKIGYHLL YYLRASKAAA GKMNLYESFA QATQLGDLHT 720
  721 CLMMDMKACQ EDDVRLLCHL TPSIYTEFPD ETLRSGELLN MIVAVIDSAQ LQELVCHVMM 780
  781 GNLVMFRKDS VLNILIQSLD WETFEQYCAW QLFLAHNIPL ETVIPILQHL KYKEHPEALS 840
  841 CLLLQLRREK PSEEMVKMVL SRPCHPDDQF TTSILRHWCM KHDELLAEHI KALLIKNNSL 900
  901 PRKRQSLRSS SSKLAQLTLE QILEHLDNLR LNLANTKQNF FSQTPILQAL QHVQASCDEA 960
  961 HKMKFSDLFS LAEEYEDSST KPPKSRRKAA LSSPRSRKNA AQPPNAEEES GSSSASEEED1020
 1021 TKPKPTKRKR KGSSAVGSDS D

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle