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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|124487039, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.17
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVLISQSVI NYVEEENIPA LKALLEKCKD VDERNECGQT PLMIAAEQGN VEIVKELIKN  60
   61 GANCNLEDLD NWTALISASK EGHIHIVEEL LKCGANLEHR DMGGWTALMW ACYKGRTDVV 120
  121 ELLLSHGANP SVTGLYSVYP IIWAAGRGHA DIVHLLLQNG AKVNCSDKYG TTPLVWAARK 180
  181 GHLECVKHLL AMGADVDQEG ANSMTALIVA VKGGYTQSVK EILKRNPNVN LTDKDGNTAL 240
  241 MIASKEGHIE IVQDLLDAGT YVNIPDRSGD TVLIGAVRGG HVEIVRALLQ KYADIDIRGQ 300
  301 DNKTALYWAV EKGNATMVRD ILQCNPDTEI CTKDGETPLI KATKMRNIEV VELLLDKGAR 360
  361 VSAVDKKGDT PLHVAIRGRS RRLAELLLRN PKDGRLLYRP NKAGETPYNI DCSHQKSILT 420
  421 QIFGARHLSP TETDGDMLGY DLYSSALADI LSEPTMQPPI CVGLYAQWGS GKSFLLKKLE 480
  481 DEMKTFAGQQ IEPLFQFSWL IVFLILLLCG GLGLVFAFTV DTNLAIAVSL SFLALLYIFF 540
  541 IVIYFGGRQE GESWNWAWAL STRLARHIGY LELLFKLMFV NPPELPEQTT KALPVRFLFT 600
  601 DYNRLSSVGG ETSLAEMIAT LSDACEREFG FLATRLFRVF KTEDSQGKKK WKKTCCLPSF 660
  661 IIFLFIVGCI IAGITLLAIF RVDPKHLTVN AILISIASIV GLAFVLNCRT WWQVLDSLLN 720
  721 SQRKRLHSAA SKLHKLKSEG FMKVLKCEVE LMARMAKTID SFTQNQTRLV VIIDGLDACE 780
  781 QDKVLQMLDT VRVLFSKGPF IAIFASDPHI IIKAINQNLN SVLRDSNING HDYMRNIVHL 840
  841 PVFLNSRGLS NARKFLVTSA TNGDISCSEA TGVQEDADRR VSQNSLGEMT KLGSKTALNR 900
  901 RDTYRRRQMQ RTITRQMSFD LTKLLVTEDW FSDISPQTMR RLLNIVSVTG RLLRANQITF 960
  961 NWDRLASWIN LTEQWPYRTS WLILYLGETE GIPDQMTLKT IYERISKNIP TTKDVEPLLE1020
 1021 IDGDIRNFEV FLSSRTPVLV ARDVKTFLPC TVNLDPKLRE IIADVRAARE QINIGGLAYP1080
 1081 PLPLHEAPPR PPSGYSQPAS VCSSSASFNG PFPGGVVSPQ PHSSYYSGLS GPQHPFYNRP1140
 1141 FFAPYLYTPR YYPGGSQHLI SRSSVKTSLP RDQNNGLEVI KEDAAEGLPS PTASSREKSW1200
 1201 TRKQLMELCD SGFNKQRQAS VPATGTSLLL SSMTVDIVCE KLRQIEGLDQ GMLPQYCTTI1260
 1261 KKANINGRVL AQCNIDELKK EMAMNFGDWH LFRSMVLEMR SVENQVVPED PRFLNENSSA1320
 1321 PVAHGESARR TSHSELPHTE LSSQTPYTLN FSFEELNTLG LDEGAPRHSN LSWQSQTRRT1380
 1381 PSLSSLNSQD SSIEISKLTD KVQAEYRDAY REYIAQMSQL EGGTGSSTIS GRSSPHSTYY1440
 1441 IGQSSSGGSI HSNLEQERGK ENELKQEEGR KSFLMKRGDV LDYSSSGVST NEASPLDPIT1500
 1501 EEDEKSDQSG SKLLPGKKSS ERPSLFQTDL KLKGSGLRYQ KLPSDEDESG TEESDNTPLL1560
 1561 KDDKDKKAEG KAERVAKSPE HSVEPIRTFI KAKEYLSDAL LDKKDSSDSG VRSNESSPNH1620
 1621 SLHNEAADDS QLEKANLIEL EDEGHSGKRG MPHSLSGLQD PVIARMSICS EDKKSPSECS1680
 1681 LIASSPEESW PSCQKAYNLN RTPSTVTLNN NTAPTNRANQ NFDEIEGVRE TSQVILRPGP1740
 1741 SPNPTAVQNE NLKSMAHKRS QRSSYTRLSK DASELHAASS DSTGFGEERE SIL

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