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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|144226253, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLAQMCLAF GWAAVILVLQ TVDTASAVRT PYDKARVFAD LSPQEIKAVH SFLMNREELG  60
   61 LQPSKEPTLA KNSVFLIEML LPKKKHVLKF LDEGRKGPNR EARAVIFFGA QDYPNVTEFA 120
  121 VGPLPRPYYI RALSPRPGHH LSWSSRPIST AEYDLLYHTL KRATMPLHQF FLDTTGFSFL 180
  181 GCDDRCLTFT DVAPRGVASG QRRSWFIVQR YVEGYFLHPT GLEILLDHGS TDVQDWRVEQ 240
  241 LWYNGKFYNN PEELARKYAV GEVDTVVLED PLPNGTEKPP LFSSYKPRGE FHTPVNVAGP 300
  301 HVVQPSGPRY KLEGNTVLYG GWSFSYRLRS SSGLQIFNVL FGGERVAYEV SVQEAVALYG 360
  361 GHTPAGMQTK YIDVGWGLGS VTHELAPGID CPETATFLDA FHYYDSDGPV HYPHALCLFE 420
  421 MPTGVPLRRH FNSNFKGGFN FYAGLKGYVL VLRTTSTVYN YDYIWDFIFY SNGVMEAKMH 480
  481 ATGYVHATFY TPEGLRHGTR LQTHLLGNIH THLVHYRVDM DVAGTKNSFQ TLTMKLENLT 540
  541 NPWSPSHSLV QPTLEQTQYS QEHQAAFRFG QTLPKYLLFS SPQKNCWGHR RSYRLQIHSM 600
  601 AEQVLPPGWQ EERAVTWARY PLAVTKYRES ERYSSSLYNQ NDPWDPPVVF EEFLRNNENI 660
  661 EDEDLVAWVT VGFLHIPHSE DVPNTATPGN SVGFLLRPFN FFPEDPSLAS RDTVIVWPQD 720
  721 KGLNRVQRWI PEDRRCLVSP PFSYNGTYKP V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle