YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|83616161
Protein type: Transmembrane
Type Confidence: 0.68
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARERRHISL TKMLNILSVA LGCYFAGKHV YAFRTESSVV RQHTADKNVE LGSIQASLRP  60
   61 DSSLDSTHTS ADIAPRGNGG RRSGVDTTPQ QDVQTLITYY NGLGGKGVTK DNAQQCLEWE 120
  121 PLANCTKKQF LRCINPPDST LTMKCFNDKC GDWSPWTICN NGIQYRYRPE CDGEYIQYKN 180
  181 CSEKNWVEFK AEQEALEAER KRQEAEAERK RQEAEAERKR QEAEAERKRQ EAEAERKRQE 240
  241 AEAERKRQEA EAERKRQEEA EAERKRQEEA EAERKRQEEA EAERKRQEEA EAERKRQEEA 300
  301 EAERKRQEEA EAERKRQEEA EAERKRQEEA EAERKRQEEA EAERKRQEEA EAERKRQEEA 360
  361 EAERKRQEEA EAERKRQEEA EAERKRQEEA EAERKRQEEA EAERKRQEEA EAERKRQEEA 420
  421 EAERKRQEEE EARQAAERKR QEEERQKEER LAKEALQKRL AEEAAQKRLE QMRRQAEEKL 480
  481 RKEKEAEMKR QEEEEQARIA AERKQQEEEE ARQAAEKKQQ EEEAARQEAE RKRQQEEEEA 540
  541 RQAAEKKQQE EEAARQEAER KRQQEEEEAR QAAERKRQEE EAARKEAEEQ LANEKSRVYD 600
  601 VIESSEVPSS VLPTDQESTD RVMDGEPDEE EQEENARKSS RKSLVKQASV GLAAVMSVVV 660
  661 GSYIYCKSPV SAGSAMAPGV SEQGFDDQSY LNHRSDDVET KVDFDENFWS NAADQNNE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle