YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62867014
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQSGTSSYF SLALNLSIFL LVFSYELTPV IAGSSKSSLD VDTSNANSSQ ETCGGSYECK  60
   61 EGVILPIWTP VNPSFGDKLA RATVYFVGLF YMFLGVSIIA DRFMASIEVI TSQEKEITIK 120
  121 KPNGETTTTT VRIWNETVSN LTLMALGSSA PEILLSVVEV CGHNFDAGEL GPNTIVGSVA 180
  181 FNMFVIIGLC VSVIPEGEHR KVKHLRVFFV TATWSIFAYT WLYLILAVIS PGIVEVWEGL 240
  241 LTLFFFPICV LFAWVADRRL LFYKYVYKRY RVGKKRGIII ETEGEPELQS KADIEMDGGM 300
  301 LNSHAEEFLD GAVDNEDKDA DEDEARREMA KILKELKQKH PEKEMEQLVE LANYHVLSQQ 360
  361 QKSRAFYRCQ ATRLMTGAGN ILKKHAADQA RKALGIHELR SEVSDNDISS KIFFDPGTYQ 420
  421 CLENCGTVAL NVVRRGGDLT STVSVEYRTE DGTANAGSDY QFTEGVIIFK PGETEKEIRV 480
  481 DIIDDDIFEE DEHFLVHLSN VKVISEGANN GNPGTNHVDA LAGLGLPSTA TVTIFDDDHA 540
  541 GIFLFEEPIV HISESIGMME VKVVRTSGAR GVVVIPYKTI EGTAKGGGED FEDTHGVLEF 600
  601 QNDEISKTIQ INIIDDEEYE KNKNSFLEIG EPQLVEMSER KAMLLHECGG FVKTGRDVYR 660
  661 KVQGRDKPIP STIISISEDG EEETLTKKEK DERRIAEMGR PTLGEHVKLE VIIEESYEFK 720
  721 STVDKLIKKT NLALLVGTNS WRDQFVGAIT VNSGDDDDEE CGQEKMPSCS DYVMHFLTVF 780
  781 WKVLFAFVPP TDYWNGWACF IVSIMMIGVL TAFIGDIASH FGCTIGLKDS VTAVVFVALG 840
  841 TSVPDTFASK VAAIQDQYAD ASIGNVTGSN AVNVFLGIGV AWSIAAIFHQ SQGRQFRVDP 900
  901 GTLAFSVTLF TIFAFVCIAV LMYRRRPEIG GELGGPRHPK IIPTTLFFSL WLMYIILSSM 960
  961 EAYCIIKGF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle