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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114047106, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNNKTLLAL AISSVCGFAH AADNLIISEY VEGSSNNKAI ELYNPTANTL DLSQYQLRFY  60
   61 FNGSTNVGTT IALNGTLAAG ATYVVADNDA SADILAVTNQ QSSASFFNGD DAIVLTYQDQ 120
  121 VIDSLGQVGV DPGTEWGSGD LSTQDNTLRR NPDQLIADPI IDDAVTFNTW LGFAKDDISD 180
  181 LGKFSAGTPT DPVEPPPSSL ACGEASTPIH ALQGSTNVSP LNGQILVVEA IVVSNQEAGL 240
  241 KGIFVQMADN EADNDPQTSE GVFVYTGNAP TGYVAGDRVR LKAKVTEYQG LTELTTVADH 300
  301 KLCAAGQPLP TAAVVTLPVN SSDDFEPFEG MRVRFSQDLV VNEVYNLGRY GEISLGSSRH 360
  361 FIGTQVAAPG ADALAVTAAN LKDSILLDDG LTAQNPDPVI FPAPGLSASN TVRVGDKATS 420
  421 LTGVMHNGFN LYRIMPTAQV NFVAENPRPQ SPVLAEGGNL KVASFNVLNY FNGDGQGGGF 480
  481 PTARGANTLS EFERQKAKIV SAMVGISADV FGLMEIENDG FGANSAIADL VAGLNAAVGE 540
  541 NRYDYVIPKV NGSNLSAIGT DAITVGLIYR SDKVSPQGDA RILSSANSPL DDAGQPLFDD 600
  601 SKNRPMLTQA FALNGSEESV VVAVNHLKSK GSECAGDPDM NDGQGNCNIT RTRAATAAGQ 660
  661 WIAAQYPEQG VLLIGDLNSY AKEDPLSALA NAGFSELFAK LEKANPYSYV FSGESGQLDH 720
  721 ALANAALVDK VLDVTEWHIN TDEPRVLDYN EEFKTAAQVQ DLYASDAYRS SDHDPVVISL 780
  781 LLEAEKVAPE ASFTQVVNGA SVQFTSTSTD SDGQIVSTQW DFGDNTQAMG EAVSHIYAQT 840
  841 GDYLVTLTVT DNDGLSHSSS QMVSVVVENV KKPPVAQIQH INLWLVDMFI STSYDTDGVI 900
  901 KQHKWKFDNG SRASGPVVFR QARRGLHTVE LTVKDNDKLT DTTSLTFR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle