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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|117612375, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNNKTLLAL AISGVCGFAH AADNLIITEY VEGSSNNKAI ELYNPTASSI DLSQYQLRFY  60
   61 FNGSTTVGTT IALTGTLAAG ATHVVADNDA SADILAVTNQ QSSASFFNGD DAIVLTYQDQ 120
  121 VIDSLGQVGV DPGSEWGSGD LSTQDNTLRR NPEQLIADTI IDDVVTFNTW LGFAKDDISD 180
  181 LGKFSAGTPT DPVEPPPSSL ACGEASTPIH ALQGSTNVSP LNGQTLVVEA IVVSNQEAGL 240
  241 KGIFVQMADN EADNDPQTSE GVFVYTGNAP TGYVAGDRVR LKAKVTEYQG LTELTTVADH 300
  301 KLCAAGQTLP TAAVVTLPVN SSDDFEPFEG MRVRFSQDLV VNEVYNLGRY GEISLGSSRH 360
  361 FIGTQVAAPG TDALAVTAAN LKDSILLDDG LTAQNPDPVI FPAPGLSASN TVRVGDKATS 420
  421 LTGVMHYGFN LYRIMPTEPV NFVAENPRPQ SPVLAEGGNL KVASFNVLNY FNGDGQGSGF 480
  481 PTARGANTLS EFERQKAKIV SAMVGTSADV FGLMEIENDG FGANSAIADL VAGLNAAVGE 540
  541 NRYAYVIPKV NGSNLSAIGT DAITVGLIYR SDKVSPQGDA RILSSANSPL DDAGQPLFDD 600
  601 SKNRPMLTQA FVLNGSEESV VVAVNHLKSK GSECAGDPDM NDGQGNCNIT RTRAATAAGQ 660
  661 WIAEQYPEQG VLLIGDLNSY AKEDPLSALA NAGFSELFAK LEKANPYSYV FSGESGQLDH 720
  721 ALANTALVDK VVDVTEWHIN TDEPRVLDYN EEFKTAAQVQ DLYASDAYRS SDHDPVVISL 780
  781 LLEAENVAPE ASFTQLVNGA SVQLTSTSID SDGQIVSTEW DFGDNSQAMG ESVSHTYAQT 840
  841 GDYLVTLTVT DNDGLSHSSS QMVSVVVENV KKPPVAQIQH INLWLVDMFI STSYDTDGVI 900
  901 KQHKWKFDNG SRASGPVVFR QARRGLHTVE LTVKDNDKLT DTTSLTFR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle