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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78507712, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MECRAFKKSA IAVMVSSLVM SSAYAAVDAE SSEPIEKITV YGEKIERSLK DTTSSISVID  60
   61 KDALDSGQYQ STSSALSEVP NVVVLTGSVP DIRGVSGNGS ASGFNSFTGG ARARVSTLVD 120
  121 GVAEPFVADL TGDTGLWDIQ QIEVYRGPQS TINGRNSIGG TVFIKTEDPT FDWQGAARVG 180
  181 YRNQDNFIDS AVMLSGPILD DELAFRVSGQ NVTGNTFNKG LEYETNPAPF DLNELITNRW 240
  241 RGKFLWQPSA IEDLKVLYSF SYNDEKGDSG RNYFTGDDPW AFKPIFQRYI ETKSTTHSVK 300
  301 VDYDLGEGRA FDLIVAYMDY DWGFESYEAL ATAQQYVDMN DQSYTVDGKY SFGLKDKDFN 360
  361 GFVGLAYFKR DQDFGSTGSS VYSGDDSTES TSIYGEMTYG LAESLWVTFG GRVMREEQLR 420
  421 NFNMLYQGSQ LREKLDNANT VTLPKLVLQY ALNDSTTLAA SVRRGYNSGG GALSLAESEY 480
  481 YYYDEEYVNT YEISSRSAFM DGDVNFSANL FYNDFDGYQA SNSARKITNI DKAVSYGIEA 540
  541 EFSAMLTENL QFISGVGLLD SETKQADPSY GDIIGNQLNS APHVTANAGL KYWLGDAFSF 600
  601 GFSGNYVGEY YADINNTESR VAGDYVVARL SLDYQTDSWR ISGFVNNLFD EQALTVNEPA 660
  661 SRSYPDGYAA IIDPRNLGVS VMYRF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle