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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|120556262, gi...
Protein type: Transmembrane
Type Confidence: 0.80
Topology Confidence: 0.14
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDMAKNLVL WLIIAAVLLM VFQNFSPTTT GQQVNYSQFV EMVQQGQVRQ VTIDGLQVQG  60
   61 VRNDGSQFQS IRPQVSDNKL MDDLLANNVE VIGKEPERQS LWTQLLVAAF PILIIIALFV 120
  121 FFMRQMQGGG GGKGPMSFGK SKARLMSEDQ IKTTFSDVAG VDEAKEDVKE LVDFLRDPSK 180
  181 FQRLGGRIPK GVLMVGPPGT GKTLLAKAIA GEAKVPFFSI SGSDFVEMFV GVGASRVRDM 240
  241 FEQAKKQSPC IIFIDEIDAV GRHRGAGMGG GHDEREQTLN QLLVEMDGFE GNEGVIVIAA 300
  301 TNRPDVLDPA LLRPGRFDRQ VVVSLPDIIG REQILKVHMK KVPLADGIDP AVIARGTPGF 360
  361 SGADLANLVN EAALFAARRN QRLVSMEELE LAKDKIMMGA ERKSMVMSEK EKRNTAYHES 420
  421 GHAIVGRLMP EHDPVYKVSI IPRGRALGVT MFLPEEDKYS HSKRYLISSI CSLFGGRIAE 480
  481 ELTLGFDGVT TGASNDIERA TSLARNMVTR WGLSEKLGPL QYDTDSEEPF LGRSAGQAHT 540
  541 VYSPETAQRI DEEVRNIIDE CYEKAKQILI DNRDKLDMMA EALMKYETID RYQIDDIMAG 600
  601 KEPRPPKNWG GSGPAGGVKA EESEQAPEPR SSDDGRQPGV GRPAGEH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle