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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88180457, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRLFLRRSG IIGHSFVYQR SSGSRFFVGF RRGTGPVKRI QLETAHEPRF TAASPTVPSL  60
   61 GLWLTPTPTP RAHRATPRAG NFHHCPAGMR RHSSGSSEDD DASPVEAPHA NSSRFSAKDS 120
  121 RSSAHPTTKL DHNRNADRPP SFSISRRSSS INWRLPESRN GNGTVEKRPS PERTSPSSPL 180
  181 GLIMTANGEL RTKEVEKTPE TVIPARRPPW RSPWAITFSA LVAAIVGIGF LVAVLHSSVT 240
  241 RQLDPKGCRM SYMRPSYAKL NEFDTEHTRL ASKYSLYLYR EQDIDRDTKV RGVPVLFIPG 300
  301 NAGSYKQVRP IAAEAANYFH NVLQHDESAM NAGTRNLDFF TVDFNEDITA FHGQTLLDQA 360
  361 EYLNEAVRYI LSLYLDPRVA DRDPDLPDPT SVIVLGHSMG GIVARTMLIM PNFQSHSINT 420
  421 IITMSAPHAR PPVSFDSQSV QTYKDINDYW RRAYSQQWAN DNPLWHVTLV SIAGGGLDTV 480
  481 VPSDYASVES LVPDTHGFTV FTSTIPNVWT SMDHQAILWC DQFRKVVAQA IYDVVDVHRA 540
  541 TQTKPRAERM RVFKKWFLTG METIAEKAAP RSEPTTLLTV DDNSDSIIAE GERLVLRNLG 600
  601 TAGTVRAHLM PIPPSGSPGM KRFTLLTDTK LDKPGEHGKL EVLFCSVIPS QPSQSWAGFP 660
  661 SQMDLSKGST GSTRLACRSA APDVVSLPAS TSSTQFPFYL NGEKEITPFS YLEYGVDDIA 720
  721 EHQFVAVVEK TTAPTPGFVV AEFSDYTQSH RTRHISLRSL LTFGMKFHLP AERPMVSEVK 780
  781 VPSLQSSLLA YNLRISHQDC NGDSELFAPL VRQYLAEPYE SKYFVNAREA TVSLHGVAPY 840
  841 VPPPLTGKLD ENGLSFQFWT DPTCSSSIHI ELTADFMGSL GKLYMRYRTV FAAFPLFIVA 900
  901 LVLRKQFRVY DTTGMFIPFL EGLDLCLRQS IPLMLASLTL LTLSTGIMAP ASNASFWHWR 960
  961 NGTSSIMDFQ HNDLLIGTED PLFLFLIPLI AIVCVGVCTV FNYMALTLTH LLGVLASLVT1020
 1021 FHPGWIGNED RKKTTPAAFF SPSPRRRMIT TAVLLLLVTT MVPYQFAYLV ACLVQLMTTV1080
 1081 RAQRIASELR STANSNFYNY THSIFILMLW ILPINLPTFV VWVHNLAVHW LTPFSSHHNV1140
 1141 LSVMPFIVLV ETLTTGKMIP RMGSRLKHVT SLLLFGMAVY AAVYGVTYAY TLHYVANFLA1200
 1201 FWLAIVHSTS DSWSLAGLTH LYSGDAGIRK RGKEP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle