YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|69276462, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHDPHHGHG AHTHDHHNDS HTGQCCGSHP AQDPATEVIR DPVCGMTVDP KAGKPTAEYE  60
   61 GRNFHFCSQS CHDKFVKQPE EYLQATDPVC GMKVDRASAK HFMRHEGHGY YFCSGSCKAK 120
  121 FEAKPESYLG ERPAPEPAPE GTLYTCPMHP EIIRDKPGSC PICGMALEPM GVPTGEEGPN 180
  181 PELVDFTRRL WVSAVLSIPL LLLAMGSMVG LPFRDWIGER TAVWLELALA TPVVVWAAIP 240
  241 FFERGYQSIV NRSPNMWTLI SIGVGTAYVY SVIATLFPGI FPHQFRGHGG TVPVYFEAAA 300
  301 VIVALVFLGQ VLELRARERT GSAIRALLDL APKTARRLND DGSETDIPLE EVHSGDRLRV 360
  361 RPGESVPVDG TVIDGRSSVD ESMITGEPVP VEKVEGDLLT GGTLNKNGSL IMRAEKVGKD 420
  421 TMLSQIVEMV AKAQRSRAPI QGLADRVSYY FVPTVVLVAI IAFFVWALFG PAPSMTFAIV 480
  481 SAVSVLIIAC PCALGLATPM SIMTATGRGA QAGVLIKDAA ALERFAKVDT LIIDKTGTLT 540
  541 EGKPRLTDMV PAGGVDPTEL LSLAAGLEKG SEHPLAEAIV EGARKKGAAL PDASDFEAAT 600
  601 GKGVSGTVSG RKVALGNLSM MQDLSVDVAP LSARANELRT EGKTVMFVAA DGKLFGLIAV 660
  661 ADPIKESTAG AIRALHESGL RIIMATGDNE RTAKAVALKL GIDEVRADML PEGKNKLVDE 720
  721 LRAGGAKVAM AGDGVNDAPA LAAADVGIAM GTGADVAVES AGITLVKGDL NGIVRARTLA 780
  781 QATIRNIKQN LFFAFVYNAL GVPIAAGVLY PLFGMLLSPM FAAAAMSLSS VSVIANALRL 840
  841 RGLGLK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle