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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|87281645, gi|...
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQRYIKKIL DARVYDVAIE TPLTEARSLS KRFGNNILLK REDLQPVFSF KIRGAYNRIA  60
   61 QLSEEQKAKG VICASAGNHA QGVALAAKNL GIKAVIVMPQ TTPEIKVRSV RDHGAKVVLK 120
  121 GDAFDEAAAH AQELIAKHGY TYIPPYDDPD VIAGQGTVAM EIMWQFSKPI HAIFICVGGG 180
  181 GLIAGMAAYI KYLRPEIKVI GVEPEDSNCL QAAMKAGKRV VLDEVGIFAD GVAVKQIGKY 240
  241 PWEICKDHVD EVITVSTDEI CAAIKDVFED TRSIAEPAGA LGVAGIKKYI EREKVEGENL 300
  301 IATLSGANMN FDRLRYISER TEVGEKREAI LAVTIPEKPG AFKTFINALH KRSITEFNYR 360
  361 YADATNATIF VGIQIAAGGH GREDLVQDLR ESGYSVVDLT DSDLAKQHIR HMVGGHAPTI 420
  421 TNEKVFQFEF PERPGALLKF LMSLGTRWNI SMFHYRNHGA AYSRVLLGAQ VDDDEVQDFE 480
  481 KMLDKVGFRY ENMTDNEAYQ LFLGQGNARS S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle