YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116184553, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFTLTTLAV SVALVAGCSN QGTPSMTQYS QSQIVAQQTQ APVAKKVPHA MTIHGDTRVD  60
   61 NYYWMRDDER KDPEILQHLE QENQYAETVL KHTEALQNEL FEEIKGRIAK DDNSVPVRKG 120
  121 NYFYSSEVTG DNEYEVHLRA KDFAGKDKQV ILDVNELAKE HEFFSIGGLY VSPNENLLAY 180
  181 GEDTLSRRVY TLKIKDLKTG NYLQDEIEGA SSAIAWQNDN NAFYYIKKDP QTLLGYQVYR 240
  241 HVLGTPQSSD ELIFEETDSA YYTSLSKSKD GEDIYIWHSS TETSGVSIID ANNPKAKAKP 300
  301 FYPRENGIEY SISKLGDWYY IYTNYQAVNF RLMKVKQEEM HDRSKWQDVI AADDNTQLVD 360
  361 FELFDDHLVY EQRSNGLASV TVRQLSTGKE FPLTFNDDAF AAYLTGNLEL DNEKVRIYYS 420
  421 SLTTPGTYYD FDLKTGESEI MKQTPVLGDF NPDNYQSERI MITARDGKEV PVSLVYRKDL 480
  481 FKKDGTNPLY QYGYGSYGAT IEPTFRSTRL SLLDRGFVYA IAHIRGSEML GRPWYEDGKK 540
  541 LTKQNTFNDF IDVTKGLVEQ GYGAKDKVFA VGGSAGGLLM GAVINQAPEL YRGIGSHVPF 600
  601 VDVVTTMLDE SIPLTTNEYD EWGNPNNKTY YDYMLSYSPY DNIKAQNYPN MLVTTGLHDS 660
  661 QVQYFEPMKW VAKLREMKTD DNVLLFKTDM EAGHGGASGR FKRLKEDALE YAFFLDLLDK 720
  721 K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle