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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67668083, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVWQGYGLMV VPYADYCGAR GAPIDRERTR SMARLRFVRR RTIVRRHVLH DQHLRARQRD  60
   61 PRRAQLLEDL EQQIALRRTR DPRARHVTRH AQRDPVRREL AERHRRRRLV ENRRVLAIRI 120
  121 EQQVAHLLRI GVQRERQHQR RDALRAVAHR HVAHVLRDQL RVRHDHGRAV AQLNFGRAHV 180
  181 DAADVAFDAR DADHVAHLHR ALGQQDQPRH EVLHDFLQTE TDTHRQRTDD PREIVPPDAE 240
  241 QPECHQHEQH VADVGEQRDQ RHAHARIHAE RGHEFAVEPA AQRAQQVEPD READHGVQDP 300
  301 VGHDVQALQP LAADHRDRAV EQIARRRAET AGHQRDRRDQ HQQARAEAGQ DRARLVQVAV 360
  361 LECEQVLDLL ARRQARREQA FARVARQLDQ DVGRAQHDLE PHELVRDEAR DRDVTDQECD 420
  421 QRRDDRERDA GMDQPGERRA LLRCLACRRE GAACTIRAQQ RRADRQRDDE RHDAATEQRD 480
  481 RQAGVDDPVD RFERTGYQQQ SGQDAGERLH RERDGIGERG QAPRRMLRAE QGAAEPGDQC 540
  541 AGRGELRELV PQVGQRRREL VVACNGEVED LDRDGRREEG RQGGRQRQRA AAQAGGRQAV 600
  601 QRDPREPALD EPAAAEPGGE CGDQQHGGDR PLPRHPRRAQ HVEQFVVEIL EPLAIVRRQV 660
  661 EQRQPELRAE DAARTERELV LQEAAVQLRE LLGQVREARL LVGGLFQRGV DLRLARVQRG 720
  721 ALLRDGRRFR RGALGRRRPE HVELRLNLRT LRCEIALQFR DIGAQLLRRV VERVQLLAVG 780
  781 RGRSLLLDAV QLGLHLLELR DGVGQGNGRR GGADAARDGR GGCRRKGRRG RDRRELQQRD 840
  841 QRDPAGVRGK SLYGHGMLTF CRQCRLPKGS RKPVVGPVAC YRGAERVVVP IACPPSPRFG 900
  901 RRAPARNSGG GLSLPVCAGP ERRPTAGERR ADALPVFDIR LRNLHNVRGK TGRRTASAPA 960
  961 AAVMPACPCA ERACRYNAAI RTAAVRPSAG ERRTTRHNTT RSGDAPKMAS TDSLPQAQAP1020
 1021 SPSIDPGSIS ARLDRLPPTR SVWKLVVLLS LGFFFELYDL LYSGYVAPGL VKSGILSATT1080
 1081 HGLFGTTGVA SFIAALFSGL FIGTIACGFL ADRFGRRAIF TWSLLWYTAA NVVMAFQDTA1140
 1141 TGLNFWRFVV GLGLGVEMVT IGTYISELVP KQIRGRAFAC EQAVGFVAVP VVAFLAYLLV1200
 1201 PHAPLGLDGW RWVVLIGAHG ALFVWWIRRE LPESPRWLAQ QGRVDEADRI MRALEAKVEA1260
 1261 EYGRPLPPPA PAEPVPPRGS FRDMWVPPYR SRTIMMTIFN VFQTVGFYGF ANWVPTLLIK1320
 1321 QGITITSSLM YSSVIALAAP IGPLIGLVIA DRFERKSVIV AMAAAIVVCG LLFSQTTVGA1380
 1381 FLIVLGIGLT LASNIMSYSF HAYQAELFPT SIRARAVGFV YSWSRFSAIF SSFVIAAVLR1440
 1441 GFGTFGVFAF IAGAMVVVMA AIGWMGPRTK GIALETISK

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