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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|84361418
Protein type: Transmembrane
Type Confidence: 0.76
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVIALVLFTV FKQFDKPRVQ EGVSYSQFMD DAKNGKVKNV VVQGRNLTVT PADGQKYQIV  60
   61 SPGDIWMVGD LMKYGVQVSG KADDEPNALM SALYYLGPTI LIIVFWFYMM RQMQGGGKGG 120
  121 AFSFGKSRAR LIDENNNAVN FSDVAGCDEA KEEVSELVDF LRDPQKFQKL GGRIPRGVLL 180
  181 VGPPGTGKTL LARAIAGEAK VPFFSISGSD FVEMFVGVGA ARVRDMFEQA KKHAPCIVFI 240
  241 DEIDAVGRHR GAGMGGGNDE REQTLNQMLV EMDGFEANSG VIVIAATNRS DVLDKALLRP 300
  301 GRFDRQVYVG LPDIRGREQI MRVHLRKVPI ANDVDAAVIA RGTPGFSGAD LANLVNEAAL 360
  361 FAARRGKRIV EMQDFEDAKD KIFMGPERKS AVIREEAKRA TAYHESGHAV IAKLLPKADP 420
  421 VHKVTIIPRG RALGVTWQLP EHDNETYSKE YLLDRLAILF GGRVAEELFL NLISTGASDD 480
  481 FNKATQTARA MVARFGMTDA LGPMVYVDDE NDGGPFGRGF TRTISEATQQ KVDAEIRRVL 540
  541 DEQYSLARRL LEENRDKVEA MTAALMEWET IDADQINDIM EGRPPRSPKS SPAVGGDSSG 600
  601 GGSTPAEVKP GNAPAPASPA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle