YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|84318222
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVALAVVSYL LVLIDRNKDY GQPELPAASA SMNTTQGLPD TPSASGTSSD VPTAQSSAAG  60
   61 SEAADKPVAV SDKLIQVKTD VLDLAIDPRG GDIVQLGLLQ YPRRLDRPDV PFPLFDNGRE 120
  121 RTYLAQSGLT GADGPDASSA GRPLFHSAQS SYQLADGQNE LVVDLSFSHD GVNYIKRFTF 180
  181 HRGLKADCSD KEKAQKKIEC INENAYQVGV SYLIDNQSGK TWSGNLFAQL KRDGSADPSS 240
  241 TTATGVSTYL GAAVWTPDSP YKKISTKDMD KEQFKESVQG GWVAWLQHYF VTAWVPTKGE 300
  301 QHQVMTRKDG QGNYIVGFTG PTLSVPAGSK VETDLTLYAG PKLQKHLKEL SPGLELTVDY 360
  361 GFLWFIAQPI FWLLQHIHSL IGNWGWSIIA LTVLIKLAFF PLSAASYRSM ARMRAVSPKM 420
  421 QAIKEQHGDD RQKMSQAMME LYKKEKINPL GGCLPILVQM PVFLSLYWVL LESVEMRQAP 480
  481 WLGWITDLSV KDPFFILPIV MGGTMLIQQM LNPTPPDPMQ AKVMKLMPII FTFFFLWFPA 540
  541 GLVLYWVVNN CLSIAQQWYI TRKIEAAAKT A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle