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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67548364, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRLVHHELR HGGGWRHRDP QPRASPAAIS RWHTVSRPAQ FSLPSIRNDR REQWRSLQID  60
   61 ASIAIAAHVC SARPTCHHAE RERPHDPAEP SARAVRRRYA VRCRFACLRG GSRHRGPRRH 120
  121 LRQGARRRRR RFQQAASGHR HRAAQAAERE PVPEAEAVDA RRHRHVRPRD DGRHVGARIH 180
  181 RQRLVEAAAR GTRRRGPRAV RGRARPECVG RPVRAADRRQ RRDVRLPQGS AREVPPAAAA 240
  241 QLGRRAENRA DRRRGGPQHV GRRVSRHQGQ PDRDRLSADP VGVRRRRVRS RRQRDDRFAR 300
  301 GAGRAEDLRR VEGVRAEGRR RVRRRRSARR AATRRRRAVD RSVAGVDSGA RRSEAVARGR 360
  361 ADRAAAAARP DGRPGADARH LADGHSEGCA AREARAGLPR VPELARHADA ARRARHSADA 420
  421 PQRVRRSGAG APVSLVSRST EGARSGPRAA AREGLATGRE HSRRSTAARA DRAGRARRGA 480
  481 APGTAEDRAG DGRGRQVTAR VHARGGVARV KPLVRSLPFV ALLGPALLVL AALALYPVAQ 540
  541 VLVDSFCRVD YAAGRRAFAG LANYRAVLGD DAFSAGFGNT LRFTIVASLA EVALGFGLAL 600
  601 LFVRAFPGRR IALPLAILPM MLSTLVCSAI WRNWLNFDGF LNALLAVFGI EGVRWLSDPH 660
  661 LALWSLALVD VWQWTPMAFL IVLAGLQSIP HELYEAARTD GASEWQCLRD ITLPLAAPQI 720
  721 GLALLLRSID TFKLFDKVYA LTGGGPGNAT QTLSTYIYDT GFRFFDVGTA SAASVLMLAA 780
  781 SALLVSGYVW QTVRKRRA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle