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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|83365388, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGPFRAMRF GPGKRRTPGR CGRALNSSFR RPSGAASARR ASSRPWRPCP PPTCPPRPRL  60
   61 PRPRPSSGGR AAPSGSPRRR RPARPSPCAP AAPSRQARAC RPRSRPRRAA SNPDRVRSAG 120
  121 PPLPKARRPV GGCGLRGRRS SSLPSGHGSF EAPASGLARG RLRRFPAPCQ APRPLRPPKR 180
  181 RTGGARSCNC FAKRRFPPGL REEPPAGLCD PASRSEVTSG LPAPASRSDF PPAVPAFPLQ 240
  241 PFARPLRSGV PGRPPVRAAH SLRGRPGSRS GSRAAVNPSG GPRGAQVLVI RDGLAHGWDA 300
  301 QARRPARGPV RAAPSRPSQP PPSIPLEGSA MLRDFFTYYR PWLGLFWLDF GCAIASGLLE 360
  361 LAFPLAVQGF IDRLLPQGDW SLTILAAAGL LAIYLVNTGL MAIVTYWGHM LGINIETEMR 420
  421 RRAFEHLQKL SFRYFDRVRT GKLVARVTRD LEEIGEVAHH GPEDLFIAIM TFIGAFLLML 480
  481 AINVKLALLT ALVVPATVAL VSIYGGRMTA TWRAIYARVA DFNVRLEENV GGIRVVQAFA 540
  541 NESHEKALFA RDNARYRDTK LAAYRVMAAS QALNYMGMRA VQVVVMVAGA AFVLSGELTT 600
  601 GGFVGFLLLV SVFFRPLEKI AAVIETYPRG IAGFRRYREL LDTEPEIADA PGARPAPALT 660
  661 GEIRFEGVGF GYDEGRPVLS GIDLSVRPGE TLAFVGPSGA GKTTLLALVP RFYDPECGRI 720
  721 TIDGMDLTDM TLESLRRRIG IVSQDVFLFG GTLRENIAYG RLEATEAEIR RAADQAQLGP 780
  781 MIAALPEGLD TVVGERGVML SGGQKQRVAI ARAFLKNPPI LILDEATSAL DTETEREIQA 840
  841 ALDALAVGRT TLIIAHRLAT IRHADRIVVM EAGRIVEVGT HAELATSGGR YARLSAA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle