YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|65318060
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIMTEQKEQ QESTGQKHMF PSLPENINYI ENKLCHSDDI KKLDLPFQNG KGTILYIESL  60
   61 ADPNLIHQLA LEPLLTRSDL SLDKAFATLN MKKETNLNYG VQLLLQGKSL YFHEHVDSFC 120
  121 IFETAISLKR DIAEPDNEGI VRGPHTGFVE DLATNLTSIR KLIKSPNIVV KYFTLGEEMH 180
  181 TKVAIAYMQN IANDDLVTEV KRRLETIKTD ALMPPGYIQE FIEDTSFSPF PQQLNTERPD 240
  241 RVAANLMEGR VAIFSDGDPT ALIVPVTLFA FYQSPDDYNN RWIVGSFVRM IRLVSFLIAF 300
  301 LLPAIYIATV AFHPDVLPLE LVYTIKASLE KVPLPPIFEA LLMELIFELL REAGIRLPSR 360
  361 VGQTIGIVGG LVIGDAIVKA GLVSYTMIIV VALTAISSFL VPSNDMSSAV RILRFPLMLL 420
  421 AALFGYVGIS FGLIITFVHL CQLHSFHTPY LSPVAPMRIK DMKDSFVRLP IWSFWERPHD 480
  481 PKPKKMQRQH VTREEEDGDK HAK

Type	Start	End	Confidence
Cytoplasmic	1	290	0.91
Transmembrane Helix	291	312	0.91
Non-Cytoplasmic	313	380	0.67
Transmembrane Helix	381	401	0.90
Cytoplasmic	402	416	0.74
Transmembrane Helix	417	440	0.89
Non-Cytoplasmic	441	503	0.88