YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|146297202, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTTSKRLRI EEDEPITKPF NWSQFIRLLS YIKPYQKYFL YSFLLMILAT LYNLAGPYLI  60
   61 RLVIDIDIPK RNIHGLFYKA SFYVVLTLLY VLSLRIRTIF MTKLGNNVVS DIRMHLFTHL 120
  121 QKLSLNFFDN RPAGKIMVRV MNDVDSLSEL LSNSILNVLI DTLSLSFIII IMLSIDVKLS 180
  181 LVAFFVLPFL IVVIMFLKNS IRVRWQDVRK KSSTLNAYIH ESIQGMKITQ AFVREETNLQ 240
  241 IFKELNTIFK NTWMKAIRVN NLFWPTIDFT GTLSTVLIFL FGVWMMKRGY TTLGTVIAFS 300
  301 NYMGMFWQPI NNISNFYNQL LVAMASTERI FEILDIQPDV KDSSHAYDLP PIKGEIRFEN 360
  361 VSFSYEEEKP VLKDVTFTIK PGETIALVGE TGAGKTTIIS LLARFYDPQR GRILIDGHDI 420
  421 RNVTLKSLRK QMGIMLQDTF IFSGTVADNI RYAKPDATMD EVIKAAKTVN AHEFIMKMEN 480
  481 GYDTEVNERG SRLSIGQRQL IAFARALLAD PKILILDEAT SAVDTQTEVL IQEAIEKLTK 540
  541 GRTSIIIAHR LSTIRNADRI FVIHNGQIVE EGNHQQLLEK RGFYYNLYTS QFKYFEK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle