YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NFH_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSFGSADAL LGAPFAPLHG GGSLHYALSR KAGAGGTRSA AGSSSGFHSW ARTSVSSVSA  60
   61 SPSRFRGAAS STDSLDTLSN GPEGCVAAVA ARSEKEQLQA LNDRFAGYID KVRQLEAHNR 120
  121 TLEGEAAALR QQKGRAAMGE LYEREVREMR GAVLRLGAAR GHVRLEQEHL LEDIAHVRQR 180
  181 LDEEARQREE AEAAARALAR FAQEAEAARV ELQKKAQALQ EECGYLRRHH QEEVGELLGQ 240
  241 IQGCGAAQAQ AQAEARDALK CDVTSALREI RAQLEGHTVQ STLQSEEWFR VRLDRLSEAA 300
  301 KVNTDAMRSA QEEITEYRRQ LQARTTELEA LKSTKESLER QRSELEDRHQ VDMASYQDAI 360
  361 QQLDNELRNT KWEMAAQLRE YQDLLNVKMA LDIEIAAYRK LLEGEECRIG FGPSPFSLTE 420
  421 GLPKIPSMST HIKVKSEEKI KVVEKSEKET VIVEEQTEEI QVTEEVTEEE DKEAQGEEEE 480
  481 EAEEGGEEAA TTSPPAEEAA SPEKETKSPV KEEAKSPAEA KSPAEAKSPA EAKSPAEVKS 540
  541 PAEVKSPAEA KSPAEAKSPA EVKSPAEVKS PAEAKSPAEA KSPAEVKSPA TVKSPGEAKS 600
  601 PAEAKSPAEV KSPVEAKSPA EAKSPASVKS PGEAKSPAEA KSPAEVKSPA TVKSPVEAKS 660
  661 PAEVKSPVTV KSPAEAKSPV EVKSPASVKS PSEAKSPAGA KSPAEAKSPV VAKSPAEAKS 720
  721 PAEAKPPAEA KSPAEAKSPA EAKSPAEAKS PAEAKSPVEV KSPEKAKSPV KEGAKSLAEA 780
  781 KSPEKAKSPV KEEIKPPAEV KSPEKAKSPM KEEAKSPEKA KTLDVKSPEA KTPAKEEAKR 840
  841 PADIRSPEQV KSPAKEEAKS PEKEETRTEK VAPKKEEVKS PVEEVKAKEP PKKVEEEKTP 900
  901 ATPKTEVKES KKDEAPKEAQ KPKAEEKEPL TEKPKDSPGE AKKEEAKEKK AAAPEEETPA 960
  961 KLGVKEEAKP KEKAEDAKAK EPSKPSEKEK PKKEEVPAAP EKKDTKEEKT TESKKPEEKP1020
 1021 KMEAKAKEED KGLPQEPSKP KTEKAEKSSS TDQKDSQPSE KAPEDKAAKG DK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle