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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TOIP1_RAT
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGERWRAEG LGEGWAIYVT PRAPIREGRR RLATQNGDGS DAPAYETHPS RHGRREVRFS  60
   61 EEPPEVYGDF EPRAAKERSP GERRTPPEKF RSDSAKEEVR ESAYNLRSRQ RRQRGPQEAE 120
  121 EMKTRRSTRL EQHSQQAQQQ LSPATSGRGL RDAQSLSEDR GEDEPSSQPV TSQTVSKKTV 180
  181 RTPETSVMSE DPISNLCRPP LRSPRPDASI VQHINPFEEG ETEDDLESSY SDVTIRIRSR 240
  241 DSVESRDEAA VAAGHHPDSL WGLPHSRGDF TAHENQPSLL PTGCQKNPQE WVEQAVRMRT 300
  301 RMAYNNIQKS DFGNQSPSTS RQQAAVQPPD ESSVKIKWWL LILVAALAMG IYWFFHTPVV 360
  361 ETTAVQEFQN QMKQLQSKYQ SQDEKLWKRG TTFLEKHLNS SLPRPQPAIL LLTAAQDAAE 420
  421 VLKCLSEQIA DAYSSFRSVR AIRIDGAGKA AQDSDLVKHE VDQELTDGFR NGQNAAVVHR 480
  481 FESLPAGSTL IFYKYCDHEN AAFKDVALVL TVLLEEQTLE ASLGLKEIEE KVRDFLKVKF 540
  541 TSSDTANSYN HMDPDKLNGL WSRISHLVLP VQPENALKAG SCL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle