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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MDM32_YEAST
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLITRLRVPT IKRPLLPITS HLVRHCIRTY VATNHGNVRP FITPYKSSLP VRCLIAQRHI  60
   61 RTFPSNDKFT TKASNIETIL LRKNNEREFK QSLLADAKNF QERFKINLKW ILIKNNRPFS 120
  121 LNEISIIASW LILSQILWLI LSTTTFISFY LFVINSVFSQ EYIHEKKIYE RLLKWLLKDH 180
  181 KCSNQDLEIT FSPEDKASML VLSPDWESNS ILIKRLNVRD EILDLDLKFH HINLNVSLKN 240
  241 WLLGRGLITN VSIYGIRGCL NLSNFINLVN SFQGDQKTEN FLKTLNNVEI TDSEILLKQS 300
  301 LSAQETPSLK FSIYNLSLPR LRLNHFISDI LSAKTFSGSI NNSLFNLFKR QQKLTAVIEN 360
  361 NNKNRMASSK FDFTDNNQEN YRTVTHQDDP NYVTTLRLNF ININDLKFNG DGKFNWLKDG 420
  421 QVEILADIML TNSTSHLSSE SKYAVVDLKV TCRDLKTTFP QEPPVLSTGD SIVSLDELKP 480
  481 IITFINSYEG MANPILKDFS ENERLTNSII WNSPNVSINR QRKSYPLTTK VTSNSTKEII 540
  541 KFHNQPNTNA NEIVLRCKMV KNLSDLQLIN INQILDQITM ELYVDLTKIV EDWEFKNKND 600
  601 WMKQWGTTFA SQLLLFGFGA MV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle