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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE38478
Protein type: Globular with Signal Peptide
Type Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWPNLLMYLL FLALPLKSWG YQVLHLADFH LDVQYSINGD NKHMCHDDGT ERNTTLGEYG  60
   61 DYMCDAPKPL IQLAIDESAR IFPNPDLIIW TGDNVAHIDG YGWEIVLDAV NQTTSLLFSR 120
  121 FPNQTILPTF GNHDYAPSNG FESESSLYTK TWELWKGKLG DENKATFLKG GYYKYRLRNA 180
  181 TAVVLNTNLY YNANKAYVNF TNKVDPADQF AFLEKELSNA EKCPNRISEN CTSIVHIVAH 240
  241 IGPGVFEKTP NFTWFRDEYN ERFLDLTVRY ANSIGWMIFG HHHTDTFHLI KDSKENNVQL 300
  301 ALMAPAVTPW FSDLPGAGAN NPTFRVYETD AYSKIQDIST YFINLDDLNK NKSTPFVFEY 360
  361 SFKDAYGITG DINPTTMSAL LDKMKNNDTL FKKYIDYNTA FWNPQMPLGV YRGAQLCSME 420
  421 YSDYPRYYSC LSKYTKSATR SLNIPLFSLF AIIYTELFLF LSFSKWVLHF QLFSDIHTRY 480
  481 KNSTYQHPKK KEKSPKNAIL INLKNTLGGE KFTVEDVKQE LAPFGIIRAV QICPIDACQA 540
  541 FVVFQNDYER SARQSVSRLL ELTSGTMFVN GYMWTICRPV KCNHVARTHE EREVEEPGIT 600
  601 TSRGVTVDEL SGIFASFIQQ NSSVSQTSIF SDSTQSFSSY SLFSRSRTVS SSSSQYAESC 660
  661 DSSATITPFS YYPAQQSTGF LNLPPPYHTL PDTAFFRRTK IIPPPPMRQE IAPVTQQIMN 720
  721 CYINSIRKGD SEIGRQRQLS LCSKMELEYN WTGSL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle