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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: catp-7
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTNNYQTLS QNVVRAIATC HTLSKINNEL HGDPLDVIMF EQTGYSLEED DSESHESIES  60
   61 IQPILIRPPK DSSLPDCQIV KQFTFSSGLQ RQSVIVTEED SMKAYCKGSP EMIMSLCRPE 120
  121 TVPENFHDIV EEYSQHGYRL IAVAEKELVV GSEVQKTPRQ SIECDLTLIG LVALENRLKP 180
  181 VTTEVIQKLN EANIRSVMVT GDNLLTALSV ARECGIIVPN KSAYLIEHEN GVVDRRGRTV 240
  241 LTIREKEDHH TERQPKIVDL TKMTNKDCQF AISGSTFSVV THEYPDLLDQ LVLVCNVFAR 300
  301 MAPEQKQLLV EHLQDVGQTV AMCGDGANDC AALKAAHAGI SLSEAEASIA APFTSKVADI 360
  361 RCVITLISEG RAALVTSYSA FLCMAGYSLT QFISILLLYW IATSYSQMQF LFIDIAIVTN 420
  421 LAFLSSKTRA HKELASTPPP TSILSTASMV SLFGQLAIGG MAQVAVFCLI TMQSWFIPFM 480
  481 PTHHDNDEDR KSLQGTAIFY VSLFHYIVLY FVFAAGPPYR ASIASNKAFL ISMIGVTVTC 540
  541 IAIVVFYVTP IQYFLGCLQM PQEFRFIILA VATVTAVISI IYDRCVDWIS ERLREKIRQR 600
  601 RKGA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle